| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3022 |
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| Symbol | |
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| ID | 6282300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3406554 |
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| End bp | 3408116 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622590 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001896638 |
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| Protein GI | 187924996 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.689492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00492897 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGCA TCTACGTTCC CCGCGATTCG TCGGCGTTGG CGCTGGGCGC TGACGCGCTC
GCACAGGCAA TTGAAAACGA AGCAGCACGC CGTGGCCTCG CCATCGAACT GGTTCGTAAC
GGTTCGCGCG GCTTGCTGTG GCTCGAACCG CTCGTTGAAG TTCAGACCTC TGAAGGCCGC
ATCGGCTATG CGAATATCGA AGCCGGCGAT GTCTCGGCGC TGTTCGACGC CGGCTTCCTT
GAAGGGGGCG CGCACGCAAA CCGCGTCGGC GTGGTCGACG CGATTCCGTA TCTGAAGAAG
CAGCAGCGCC TGACGTTCGC CCGGATCGGC ATTACAGACC CGCTTTCCAT CGACGACTAC
GTCGCCCACG GCGGCCTCGA AGGCTTGCGC AACGCTTTGC AAACCGACGG CGACGCCGCC
TGCGAAGCCT TGATCGAATC CGGCCTGCGC GGCCGCGGCG GCGCGGCCTT CCCCGCCGGC
ATCAAATGGC GCACGGTGCG CGGCGCCAAG GCGGCGCAGA AGTACATCGT CTGCAACGCG
GACGAAGGCG ATTCCGGCAC ATTCTCCGAT CGCCTCGTGA TGGAAAGCGA TCCGTACGTG
CTGATCGAAG GCATGATCAT CGCGGGTGTC GTGACCGGCG CGACGGTCGG CCATATCTAC
GTGCGCAGCG AGTATCCGCA TTCGATCGCC ACGCTCGAAG CCGCCATCGC CAAAGCGCGC
GCCGCCGGCT GGCTCGGCGA CCGCGTGCTC GGCTCGGCAC ATCGCTTCGA ACTGTTCGTC
GCGAAAGGCG CCGGCGCTTA CGTATGCGGC GAGGAAACGG CGCTGCTCGA ATCGCTCGAA
GGTAAGCGCG GCATCGTGCG CGCCAAGCCG CCGGTGCCGG CGCTCGTCGG CCTGTTCGGC
CAGCCGACCG TGATCAACAA CGTCATCACG CTCGCCACGG TGCCGATCAT CTTCGCGCGC
GGCGCGGCGT TCTACAAAGA CTTCGGCATG GGCCGCTCGC GCGGCACGCT GCCGTTCCAA
CTCGCGGGCA ATGTGAAGCA AGGCGGCCTG GTCGAACTCG CGTTCGGCGT GACGCTGCGC
GAATTGCTGT ACGACTACGG CGGCGGCACG GCGAGTGGCC GGCCGGCGCG CGCGGTACAA
GTGGGCGGCC CGCTGGGCAC GTATCTGCCG GAAAGCCAAT GGGACATTCC CATGGACTAC
GAGGCGTACG CGGCAGTCGG CGCGGTGGTG GGTCACGGCG GCCTCGTCGT GCATGACGAC
ACCTCGAATC TCGCCGAACT CGCGCAGTAC GCCATGCACT TTTGCGCGCT CGAATCGTGC
GGCAAATGCA CGCCGTGCCG GATCGGCTCG ACGCGCGGCG TCGAAGTGAT CGGACGGATT
CGCAACGGCG ACACGTCCAC ACGACAAGTG CAGTTGCTGC GCGATCTGTG CGACACGATG
GTGTCCGGTT CGCTGTGCGC GATGGGCGGC ATGACCCCGT TCCCGGTGTT GTCCGCGCTC
GATCATTTCC CCGAAGACTT CGGTCTCGCC GACGTATCTC ATCACACGCC GAAAGCGGCC
TGA
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| Protein sequence | MTRIYVPRDS SALALGADAL AQAIENEAAR RGLAIELVRN GSRGLLWLEP LVEVQTSEGR
IGYANIEAGD VSALFDAGFL EGGAHANRVG VVDAIPYLKK QQRLTFARIG ITDPLSIDDY
VAHGGLEGLR NALQTDGDAA CEALIESGLR GRGGAAFPAG IKWRTVRGAK AAQKYIVCNA
DEGDSGTFSD RLVMESDPYV LIEGMIIAGV VTGATVGHIY VRSEYPHSIA TLEAAIAKAR
AAGWLGDRVL GSAHRFELFV AKGAGAYVCG EETALLESLE GKRGIVRAKP PVPALVGLFG
QPTVINNVIT LATVPIIFAR GAAFYKDFGM GRSRGTLPFQ LAGNVKQGGL VELAFGVTLR
ELLYDYGGGT ASGRPARAVQ VGGPLGTYLP ESQWDIPMDY EAYAAVGAVV GHGGLVVHDD
TSNLAELAQY AMHFCALESC GKCTPCRIGS TRGVEVIGRI RNGDTSTRQV QLLRDLCDTM
VSGSLCAMGG MTPFPVLSAL DHFPEDFGLA DVSHHTPKAA
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