| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3009 |
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| Symbol | |
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| ID | 6284049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3394154 |
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| End bp | 3396790 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622579 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_001896627 |
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| Protein GI | 187924985 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.354996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0330044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAT TCGCCAAAGA GACTCTGCCA ATCTCCCTAG AGGAGGAAAT GCGCCGTTCG
TATCTCGATT ACGCGATGAG CGTGATCGTG GGGCGTGCGC TTCCCGATGT TCGCGATGGC
CTGAAGCCGG TGCACCGGCG CGTGCTGTAC GCGATGCACG AACTGAATAA CGACTGGAAC
CGGGCGTACA AGAAGTCGGC GCGTATTGTC GGCGACGTCA TCGGTAAATA TCACCCGCAC
GGCGATACGG CTGTTTACGA CACCATCGTC CGGATGGCGC AAGACTTCTC GTTGCGCTAC
ATGCTGGTTG ACGGTCAGGG CAATTTCGGC TCGGTCGACG GCGACAACGC CGCGGCGATG
CGGTACACCG AAATCCGCAT GGCGAAGATC GGCCACGAAC TGCTTGCCGA CATCGACAAG
GAAACGGTCG ATTTCACGCC GAACTACGAC GGCAGCGAAA ACGAACCGGC CATTCTGCCG
GCGCGCATCC CCAATCTGCT GATCAATGGC TCGTCCGGCA TCGCGGTCGG CATGGCGACC
AACATCCCGC CGCACAACCT CAACGAGGTT GTCGACGCCT GCCAGCATCT GCTCAAGAAC
CCGGAAGCCA CGATCGACGA ACTGATCGAG ATCATTCCGG CGCCCGACTT CCCGACCGCC
GGCATCATCT ACGGCGTGGC CGGCGTGCGC GACGGCTATC GCACGGGCCG TGGCCGCGTG
GTGATGCGCG CGCTCACGCA CTTCGAGGAA ATCGACCGCG GTCAGCGCAT GTCGATCATC
GTCGACGAAC TGCCGTACCA GGTGAACAAG CGCTCACTTC TGGAGCGCAT CGCCGAGCTG
GTCAACGAGA AGAAGCTCGA AGGCATTTCC GACATCCGCG ACGAGTCCGA CAAGAGCGGC
ATGCGCGTCG TGATCGAGCT CAAGCGCGGC GAAGTGCCGG AAGTCGTTCT GAACAATCTG
TACAAGGCGA CCCAGCTTCA GGACACCTTC GGCATGAACA TGGTCGCGCT GGTCGACGGC
CAGCCGAAGC TGCTGAACCT GAAGGAAATG CTGTCGTGCT TCCTGTCGCA TCGCCGGGAA
GTGCTGACGC GGCGCACTGT ATACGAACTG CGCAAGGCGC GCGAACGCGG CCACGTGCTT
GAAGGTCTGG CGGTCGCGCT CGCCAATATC GACGAGTTCA TCGCGATCAT CAAGGCCGCG
CCGACTCCGC CGATCGCCAA GCAGGAATTG ATGGCGCGTC CGTGGGATTC GTCGCTGGTG
CGCGAAATGT TGTCGCGTGC CGAGACGGAA AACGCGACGG CGGGCGGTCG CGATGCCTAC
CGTCCTGACG GACTCAATCC GTCGTTCGGT ATGCAGTCCG ACGGCCTCTA CCGTCTGTCC
GACACCCAGG CTCAGGAAAT TCTGCAGATG CGTCTGCAGC GCCTGACTGG CCTGGAGCAG
GACAAGATCA TCGGCGAGTA CCGCGAAGTG ATGGCGCAAA TCGCCGACCT GCTGGACATT
CTGGCTCGTC CGGAACGCAT CACGGCGATC ATCGTCGACG AACTGACGTC GATCAAAGCC
GAATTCGGCG ACGCGCGTCG CTCGAAGATC GAGCTGAACG CCACCGAACT GAACACCGAA
GACCTGATCA CGCCGCAAGA GATGGTCGTG ACCATGTCGC ACGCGGGCTA CGTGAAGTCG
CAGCCGCTGT CCGAATACAG CGCGCAGAAG CGCGGTGGCC GCGGCAAGCA GGCCACGGCA
ATGAAGGAAG ACGACTGGAT CGACACGCTG TTTATCGCGA ACACGCACGA TCACATTCTG
TGCTTCTCGA ATCGCGGTCG CGTCTACAGC GTGAAGGTGT ACGAAGTGCC GCAAGGTTCG
CGGAACTCGC GCGGCCGTCC GATCATCAAT ATCTTCCCGC TTCAGGAAGG CGAGAAGATC
ACGGTCGTCC TGCCGGTCAA GGAATTTTCG GCTGACAAAT TCGTCTTCAT GGGCACCGCG
TTAGGAACCG TAAAAAAGAC GCCGCTGGAA GCCTTTGGTC GCGTGCTGCG CAAGGGTATT
ATTGCGGTCG GTCTGGATGA CGGCGATTAC CTGATCGGCG CCGCCATTAC TGACGGCCAG
CACGACGTGA TGCTGTTCTC GGATTCGGGC AAGGCGGTTC GCTTCGACGA GAACGACGTG
CGTCCGATGG GCCGGGAAGC TCGCGGCGTG CGCGGCATGC AGCTCGAAGA CGGTCAGAAC
GTGATCGCGC TGCTGGTGGC CGGCGACGAG CAGCAGTCGG TGCTGACCGC AACGGAAAAC
GGTTTCGGCA AGCGCACGCC GATCACCGAG TACACCCGTC ATGGTCGCGG CACGAAGGGC
ATGATCGCAA TCCAGACGTC GGAGCGTAAC GGCAAGGTCG TGGCCGCCAC GCTAGTGGAT
CAGGAAGCGC AGATCATGCT GATCACCAAT ACCGGCGTGC TGATCCGTAC GCGTGTCTCG
GAAATTCGAG AAATGGGACG TGCAACCCAA GGTGTTACAC TCATCAGCCT TGACGAAGGG
ACCAAGCTTT CAGGTCTGCA ACAGGTTGCT GAGGCCGAGG CAGAAAGTGA TGCGGAAGGC
GACGCCGAAG GTCCCGCAGA AGGCGACAAC GGTGGCGAAG AAGGCGGTGC GGCCTGA
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| Protein sequence | MDQFAKETLP ISLEEEMRRS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMHELNNDWN
RAYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQDFSLRY MLVDGQGNFG SVDGDNAAAM
RYTEIRMAKI GHELLADIDK ETVDFTPNYD GSENEPAILP ARIPNLLING SSGIAVGMAT
NIPPHNLNEV VDACQHLLKN PEATIDELIE IIPAPDFPTA GIIYGVAGVR DGYRTGRGRV
VMRALTHFEE IDRGQRMSII VDELPYQVNK RSLLERIAEL VNEKKLEGIS DIRDESDKSG
MRVVIELKRG EVPEVVLNNL YKATQLQDTF GMNMVALVDG QPKLLNLKEM LSCFLSHRRE
VLTRRTVYEL RKARERGHVL EGLAVALANI DEFIAIIKAA PTPPIAKQEL MARPWDSSLV
REMLSRAETE NATAGGRDAY RPDGLNPSFG MQSDGLYRLS DTQAQEILQM RLQRLTGLEQ
DKIIGEYREV MAQIADLLDI LARPERITAI IVDELTSIKA EFGDARRSKI ELNATELNTE
DLITPQEMVV TMSHAGYVKS QPLSEYSAQK RGGRGKQATA MKEDDWIDTL FIANTHDHIL
CFSNRGRVYS VKVYEVPQGS RNSRGRPIIN IFPLQEGEKI TVVLPVKEFS ADKFVFMGTA
LGTVKKTPLE AFGRVLRKGI IAVGLDDGDY LIGAAITDGQ HDVMLFSDSG KAVRFDENDV
RPMGREARGV RGMQLEDGQN VIALLVAGDE QQSVLTATEN GFGKRTPITE YTRHGRGTKG
MIAIQTSERN GKVVAATLVD QEAQIMLITN TGVLIRTRVS EIREMGRATQ GVTLISLDEG
TKLSGLQQVA EAEAESDAEG DAEGPAEGDN GGEEGGAA
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