| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3008 |
|---|
| Symbol | |
|---|
| ID | 6284048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3393428 |
|---|
| End bp | 3394030 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642622578 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001896626 |
|---|
| Protein GI | 187924984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.439263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0175775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC GATTCAAACA ACTGGTGTTG CTGGCTGCCC TCGTGCCGAC CTTTGCCATG
GCTCAAGCAC TTCAGAGCTC GGCTCCGGCG GCTCCGGCTG CTGCCGCGGC ACCGGTTGAT
CCGGCCAAGC AGGCTGCAAT CAAGGACCTG TTGGACGCAA TCGACGCGCA GAAGCTCGTG
GGCGCGATCG GCAACAGCGC CCAGATGCAA GCCAAGCAGC TGGTGCCGGC CATCCTGTCG
GACGCGCTGA GCGAAAACAA GACGATGACG GACAAGCAGA AGCAGGCTTC CGTGCCGACG
CTGCAAAAGA ACGCAGTGCC GAAGCTGGTT GACGGCGCAG GCCAGGTGTT CGCTACGGAT
TCGTTCCGTC AGGACGCCAT GCAAGCTCAG TACGACGCGT ACGCGAAGTA CTACAGCACG
TCGGAAATCA AGGATCTGAC CACGTTCTAC AAGAGCCCGA CCGGCCGCAA GTTCATCCAG
GTGCAAGACC AGGTTGGCCG CGATGTCGTG AACGGCTTGA TGCAAAAGTA CATGCCGCAA
TCGATCAAGG CAACGCGTGA CCAGGCCGAC AAGGAAGTCG CTTCGGTCAA GCCGGCCAAG
TAA
|
|---|
| Protein sequence | MQKRFKQLVL LAALVPTFAM AQALQSSAPA APAAAAAPVD PAKQAAIKDL LDAIDAQKLV
GAIGNSAQMQ AKQLVPAILS DALSENKTMT DKQKQASVPT LQKNAVPKLV DGAGQVFATD
SFRQDAMQAQ YDAYAKYYST SEIKDLTTFY KSPTGRKFIQ VQDQVGRDVV NGLMQKYMPQ
SIKATRDQAD KEVASVKPAK
|
|---|
| |