Gene Bphyt_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3007 
Symbol 
ID6284047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3392048 
End bp3393130 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content61% 
IMG OID642622577 
Productphosphoserine aminotransferase 
Protein accessionYP_001896625 
Protein GI187924983 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.277859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0187233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCT TTAATTTCTC CGCCGGCCCT GCGGCCATGC CCGAAGAAGT GCTGCGTCAA 
GCCGCCGACG AAATGCTCGA TTGGCAAGGC AGCGGCATGA GCGTGATGGA AATGAGCCAT
CGCGGGAAAG AGTTCATGTC GATCCACGAG GAAGCGCTCG TCGATCTGCG CGACCTGCTC
GAGGTGCCGG CGAGCCATCG CATTCTGTTC CTGCAAGGCG GCGGTCTCGG CGAGAACGCA
ATCGTGCCGA TGAATCTGAT GGGCGCGAAG CCGCGCGCGG ATTTCGTCGT AACGGGTTCC
TGGTCGCAGA AGTCGTTCAA GGAAGCGCAG AAGTACGGCA CCGTGCATCT GGCGGCGAGC
GGTCAGACGG CTGAGGGTTT CACGCGCGCC CCCGCGCGCT CCGAATGGCA ACTGTCGGAC
GACCCGGCTT ACGTGCATCT GTGCACGAAC GAGACGATCC ACGGCGTCGA GACATTCGAG
ATTCCCGATC TCGGCGATAT TCCGCTCGTG GCCGACGCCT CGTCGCACAT CCTGTCGCGT
CCCATGGACA TCGCCAAATA TGGCGTACTG TTCGGCGGCG CGCAGAAGAA CATCGGCATG
GCCGGCGTGA CGGTGGTGAT CGTGCGCGAA GACATGCTGG ATCGCGCGCA GTCGATCTGC
CCGTCGGCGT TCGAATGGAA GACCGTCGCC GAGAACAATT CGATGTACAA CACGCCGCCC
ACTTATGCGA TCTACATCGC CGGGCTGGTG TTCAAGTGGT TGAAGAAGCA GGGCGGCCTT
GCCGCGATGG AAGCGCGTAA CGTCGAAAAG TCGAAACTGC TGTACGACGC TGTCGACACG
AGCAGCTTCT ATCTGAACAA GGTCGAGCGT GGCTCGCGCT CGCGGATGAA CGTCCCGTTT
TTCCTCGCCG ACGAGTCGCG CAACGAAGAT TTCCTGGCCG GCGCGAAAGC GCGGGGAATG
GTGCAGCTAA AGGGCCACAA GTCCGTCGGC GGCATGCGGG CGTCGATTTA TAACGCCGTC
CCGCTCGAGG GCGTCAAAGC GCTTGTCGAA TACATGAAGG AATTCGAACA GCGCAGCGCC
TGA
 
Protein sequence
MRVFNFSAGP AAMPEEVLRQ AADEMLDWQG SGMSVMEMSH RGKEFMSIHE EALVDLRDLL 
EVPASHRILF LQGGGLGENA IVPMNLMGAK PRADFVVTGS WSQKSFKEAQ KYGTVHLAAS
GQTAEGFTRA PARSEWQLSD DPAYVHLCTN ETIHGVETFE IPDLGDIPLV ADASSHILSR
PMDIAKYGVL FGGAQKNIGM AGVTVVIVRE DMLDRAQSIC PSAFEWKTVA ENNSMYNTPP
TYAIYIAGLV FKWLKKQGGL AAMEARNVEK SKLLYDAVDT SSFYLNKVER GSRSRMNVPF
FLADESRNED FLAGAKARGM VQLKGHKSVG GMRASIYNAV PLEGVKALVE YMKEFEQRSA