| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3004 |
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| Symbol | |
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| ID | 6282802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3388711 |
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| End bp | 3389652 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642622574 |
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| Product | Prephenate dehydrogenase |
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| Protein accession | YP_001896622 |
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| Protein GI | 187924980 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.548838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0491743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG TGGCCGCGTT TTCATTTAAC AAGCTGGTAA TTTTCGGTGT CGGCCTGATC
GGCGGATCGC TTGCGCGCGC GTTGCGCGAA CGTGGCGAGG CCGATGGTGC GCGCAAGGTG
ATCGGGGTGG GACGTTCATC CGCATCGACT GAGCGCGCGC TGGAACTTGG TGTGATCGAC
GGTTCGGCGT CGCTGAACGA CGATGCCGCA CTCAGTGAAG CGCTTAAGGG CGCCGACTTC
GTCCTGCTGG CCGCGCCGGT CGCGCAGACG CAGCCGCTGC TCGAACGCAT CGCGCCGTTT
CTCGACGCCG CGACGATCGT CACCGACGCC GGCAGCACCA AATCGGACGT GGTCGCCGCC
GCTCGGGCGG CGCTCGGCGC GCGCATCGGC CAGTTCGTGC CGGGGCATCC GATTGCCGGC
CGCGAGGCCA GCGGCGTGGA AGCGGCGTTG CCCGATCTGT ATGTCGGCCG CAACGTGGTG
TTGTGCCCGC TGCCTGAGAA TGCGCCGGCA GACGTGGAAC GCGTCGCGGC GATGTGGCGC
GCTACCGGCG CGCTCGTGCG CGACATGGCG CCCGAGCAGC ACGACCGCGT GCTCGCGTCG
GTCAGCCATT TGCCGCACGT GCTCTCGTTC GCGCTGGTCG AGCAGATTCT CAATTCGCCC
GACGCCGCGC TGAAATTCTC GTTCGCCGCG GGCGGTTTCC GCGACTTCAC GCGGATCGCC
GCGTCGAGCC CGGAAATGTG GCGCGACGTG TGCGTCGCCA ATCGCGTCGC GCTGCTGGAC
GAACTCGACG CCTACACGGC GGTGCTGGCG CGCCTGCGCG CCGCCATCGA AGCCGCCGAC
GGCGCGGCCC TCGAAGCCGT GTTCGCGCGT TCTCGCGTGG CGCGGACCGA ATGGCAGGAG
CAGCGCGCGG CCGGCGTCGC GAATAGCGAC GCGTCGAAAT AA
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| Protein sequence | MTDVAAFSFN KLVIFGVGLI GGSLARALRE RGEADGARKV IGVGRSSAST ERALELGVID
GSASLNDDAA LSEALKGADF VLLAAPVAQT QPLLERIAPF LDAATIVTDA GSTKSDVVAA
ARAALGARIG QFVPGHPIAG REASGVEAAL PDLYVGRNVV LCPLPENAPA DVERVAAMWR
ATGALVRDMA PEQHDRVLAS VSHLPHVLSF ALVEQILNSP DAALKFSFAA GGFRDFTRIA
ASSPEMWRDV CVANRVALLD ELDAYTAVLA RLRAAIEAAD GAALEAVFAR SRVARTEWQE
QRAAGVANSD ASK
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