Gene Bphyt_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3002 
Symbolcmk 
ID6282800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3386665 
End bp3387351 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID642622572 
Productcytidylate kinase 
Protein accessionYP_001896620 
Protein GI187924978 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.890159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00995031 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCGA CCCGTCCCTT TCACCAGACG CCCGTCATTA CGATCGACGG CCCGAGTGCC 
TCCGGCAAAG GCACCGTGGC CGCGCTGGTG GCCGCGAGCC TCGGCTTCCA CTTGCTGGAT
AGCGGCGCGC TGTACCGTCT CGCCGCGCTC GCCAGCTTGC GCTACGGCAT TTCGGGCGAC
GATGTCGACG CCCTTGTAAA ACTGATCGAC GATCTACACA TCACCTTTCG CGAGGGACTG
GCGCAACTCG ACGGCGTCGA CGTATCGGCC GAGATTCGCG CCGAGGAGGT GGGCGGCCGT
GCCTCGGCGA TTGCCGTGCA CGCGCCGGTG CGTGCCGCGC TGGTGGCGCG TCAGCGGGCT
TTCCGCAAGG AGCCGGGACT GGTCGCCGAC GGCCGCGACA TGGGCACGGT GATCTTCCAG
GATGCCGTGC TGAAGGTGTT CATGACCGCA AGCGTCGAGG CCCGCGCGGC GCGCCGGCAT
AAGCAATTGA TCCAAAAAGG ATTTTCTGCT AATATAGATG ACTTGCTCCG GGATTTGCGT
GAGCGCGATG AGCGTGACAG TCAGCGTGTA GCCGCGCCAC TCAAGCCCGC AGCGGATGCC
AAGCTGCTTG ATACCTCCGC ATTGTCGGTC GACCAGGCGG TCGAGCAAGT GGTGCAGTGG
TATGAAGCTT TAGTCCCACA TGCCTGA
 
Protein sequence
MKPTRPFHQT PVITIDGPSA SGKGTVAALV AASLGFHLLD SGALYRLAAL ASLRYGISGD 
DVDALVKLID DLHITFREGL AQLDGVDVSA EIRAEEVGGR ASAIAVHAPV RAALVARQRA
FRKEPGLVAD GRDMGTVIFQ DAVLKVFMTA SVEARAARRH KQLIQKGFSA NIDDLLRDLR
ERDERDSQRV AAPLKPAADA KLLDTSALSV DQAVEQVVQW YEALVPHA