| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2982 |
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| Symbol | |
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| ID | 6280748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3364841 |
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| End bp | 3366127 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622552 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001896600 |
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| Protein GI | 187924958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00652065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAGTCG TCGTTTTGGG CAGTGGCGTT GTCGGCGTGA CCAGCGCGTA TTACCTGGCG
CGCGCGGGAC ACGAAGTGAC CGTTATCGAT CGCGAGGCCG GGCCGGCGCT CGAAACCAGT
TTCGCCAACG CCGGCCAGAT CTCGCCGGGC TACGCGTCGC CGTGGGCTGC ACCGGGCGTG
CCGCTGAAGG CGGTCAAGTG GATGTTCCAG AAACACGCGC CGCTGGCGAT CCGCCTCGAC
GGCACTCAAT TCCAGTTGCA GTGGATGTGG CAAATGCTGC AGAACTGCAC GTCGTCGCGT
TATGCGGTGA ACAAGGGCCG CATGGTTCGC CTCGCCGAAT ACAGCCGCGA CTGCCTGCAA
GCGCTACGCG CCGAAACCGG CATTCAGTAT GAAGGCCGCA CAGGCGGCAC GCTCCAGGTA
TTCCGCACGC AGCAGCAATT CGATGGCGCC GCGAAAGACA TCGCCGTGCT GCAGGAAGCC
AACGTGCCGT ACGAACTGCT GTCGCCGGCC GAGCTCGCGC GCGCCGAACC GGCGCTCGCC
GCCGTGTCGC ATAAGCTGAC CGGCGGTCTG CGCCTGCCGG GCGACGAAAC CGGCGACTGC
CAGATGTTCA CCACGCGCCT CGCCGCGCTG GCTGAAGAAC TGGGCGTCAA GTTCCGCTAC
AACACGCCGA TCGACGCACT CGCGATGGCC GGCGACCGCA TCGCCGGCGT GAAGTGCGGC
GAAGAACTGG TGCGTGCGGA TTCGTTCGTG GTCGCACTGG GTTCGTACTC GACGCAGTTT
CTGTCCGGTC TGGTGAAGAT TCCGGTCTAT CCGCTCAAGG GTTATTCGAT CACCGCGCCG
ATCGTCAACG AAGCATCGGC GCCGGTATCG ACCGTGCTCG ACGAAACGTA CAAGATCGCG
ATCACGCGTT TCGACGACCG GATTCGCGTG GGCGGCATGG CGGAGATCGT CGGCTTCGAC
AAATCGTTGC GCCAGGCGCG CCGCGAAACG CTGGAACTGT GCGTGAACGA CCTGTTCCCG
GGCGGCGGCG ATACGTCGAA GGCCACCTTC TGGACCGGTC TGCGCCCGAT GACACCGGAC
GGCACGCCGA TCGTCGGCCG CACTCCCGTG CCGAACCTGT TCCTTAACAC CGGCCACGGC
ACGCTGGGCT GGACGATGTC GTGTGGCTCG GGCCAACTGC TCGCCGACGT GATGTCGGGC
AAGCAACCGG CCATCAAGGC GGACGATCTG TCGGTGCATC GCTATCTCGG CGAGGTTGGC
GGTGCGCATC GCCCGGCTTA TGCCTAA
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| Protein sequence | MRVVVLGSGV VGVTSAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YASPWAAPGV
PLKAVKWMFQ KHAPLAIRLD GTQFQLQWMW QMLQNCTSSR YAVNKGRMVR LAEYSRDCLQ
ALRAETGIQY EGRTGGTLQV FRTQQQFDGA AKDIAVLQEA NVPYELLSPA ELARAEPALA
AVSHKLTGGL RLPGDETGDC QMFTTRLAAL AEELGVKFRY NTPIDALAMA GDRIAGVKCG
EELVRADSFV VALGSYSTQF LSGLVKIPVY PLKGYSITAP IVNEASAPVS TVLDETYKIA
ITRFDDRIRV GGMAEIVGFD KSLRQARRET LELCVNDLFP GGGDTSKATF WTGLRPMTPD
GTPIVGRTPV PNLFLNTGHG TLGWTMSCGS GQLLADVMSG KQPAIKADDL SVHRYLGEVG
GAHRPAYA
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