| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2975 |
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| Symbol | trmD |
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| ID | 6280948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3358864 |
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| End bp | 3359631 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622545 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001896593 |
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| Protein GI | 187924951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0969353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0518366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTTCG ATGTCGTTAC GCTCTTTCCT GACATGTTTC GCGCGCTGAC CGACTGGGGT
ATCACCAGCC GTGCGGCGAA GCAGGAGCGC TACGCGTTGC GTACGTGGAA TCCGCGCGAT
TTCACGACCG ACAACTACCG CACGATCGAC GATCGCCCAT ATGGCGGCGG CCCCGGCATG
GTGATGCTGG CCAAACCGCT GGAAGACGCG ATCGGCGCGG CGAAAGCGGC GCAGGCGGAG
CAGGGCATCG GCGCGTCGCG TGTTGTGATG ATGTCGCCGC AAGGTGCCAC GTTGAATCAC
GACCGCGTCA TGCAGTTTGC TGCCGAACCC GGCCTGATCC TGTTGTGCGG GCGCTACGAA
GCGATTGATC AGCGTTTGCT CGACCGTGTC GTCGACGAAG AAGTCAGCCT GGGCGACTTC
GTGCTGTCGG GCGGCGAACT GCCGGCCATG GCCTTGATGG ACGCTGTGGT GCGTCAGTTG
CCCGGCGTGC TGAACGACTC GCAGTCGGCG GTGCAGGATA GTTTTGTCGA CGTGCTGCTG
GATTGCCCGC ATTACACGCG CCCCGAGGAA TACGACGGCG TGCGCGTGCC CGATGTGCTG
CTCGGCGGCC ATCATGCGGA GATCGAAGCG TGGCGCCGGC GTGAAGCCTT GCGTAACACG
TTGAAGAAAC GGCCCGATCT GATCGTGAAG GCCAGAAGGA ACAAGATGTT GAGCCGTGCC
GACGAGGCAT GGCTTGCGAG TCTCGCAAAG GAAGAGTCGA AGGCGTAA
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| Protein sequence | MQFDVVTLFP DMFRALTDWG ITSRAAKQER YALRTWNPRD FTTDNYRTID DRPYGGGPGM
VMLAKPLEDA IGAAKAAQAE QGIGASRVVM MSPQGATLNH DRVMQFAAEP GLILLCGRYE
AIDQRLLDRV VDEEVSLGDF VLSGGELPAM ALMDAVVRQL PGVLNDSQSA VQDSFVDVLL
DCPHYTRPEE YDGVRVPDVL LGGHHAEIEA WRRREALRNT LKKRPDLIVK ARRNKMLSRA
DEAWLASLAK EESKA
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