| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2972 |
|---|
| Symbol | |
|---|
| ID | 6280945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3356455 |
|---|
| End bp | 3357393 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642622542 |
|---|
| Product | CobD/CbiB family protein |
|---|
| Protein accession | YP_001896590 |
|---|
| Protein GI | 187924948 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.402163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.15784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTT TCTCCGTATT GCTGGCTCTG ATCATTGAAC AGGTACGCGC GCTGTCGCCG
AACAATCCGG TGTCCGCGTT GCTTCAATAC CATGCGGAGT CGGCGGCGCA CGGATTCGAT
GCCGGCAAGC CGAAGCACGG CTTGCTTGCC TGGCTCGTGG TGGTGGTGCC GTGGACGCTG
GTCGTCGCGC TCGTCTACTA CGTGCTGTAT CACATTCACT TTGCGCTGGC GTTCCTGTGG
AACGTCGCGG TGCTGTACTT CACGCTGGGC TTCCGCCAGT TCAGCCACTA TTTCACGGAC
ATCCACCTCG CGTTGAATAA CGACGACGTG CCGCGCGCGC GTGAGATCCT GAACGAATGG
ACCGGGCTCG ATACGGTCGA TATGCCCGTC AGCGAGATCG TGCGTCATAC GCTGATTCAC
GCGGTGGTCG CTTCACATCG GCACGTGTTC GGCGTGTTCT TCTGGTTCCT GATTCCGGTC
GGACCGGCGG GCGCCGTGCT GTATCGGATC GCCGAATATC TGGCGCGCAC GTGGGCGCGG
CCGGTCGACG ATCGCACCGT CGCGTTTTCG AGCTTTGCGC AGCGTGCTTT CTTCGTGATC
GACTGGGTGC CGGCGCGGTT GACGTCGCTG GGCTTTGCGA TCGTCGGCAA TTTTGAAGAC
GCGATTTATG CATGGCGCAA CCATGCGCGC CAATGGCCGG ACGCGAACGA CGGCGTGTTG
CTGGCCGCGG GCAGCGGTGC CTTGGGCGCA CGTCTGAGCG GGCCGCTGGC TGAACCGTCG
AGCCTCGACG CGCTCGCCAC TGGCGACGGC GGCCCGATGC AGGTCGGCGA CGACTGCACC
CCGCGCACGC TGCAATCGGC CGTGGGCCTG GTGTGGCGCG CGGTGGTACT GTGGATGATT
TTGTTGCTGA TGCTGACGAT TGCGGTGTGG CTGGCTTGA
|
|---|
| Protein sequence | MTFFSVLLAL IIEQVRALSP NNPVSALLQY HAESAAHGFD AGKPKHGLLA WLVVVVPWTL
VVALVYYVLY HIHFALAFLW NVAVLYFTLG FRQFSHYFTD IHLALNNDDV PRAREILNEW
TGLDTVDMPV SEIVRHTLIH AVVASHRHVF GVFFWFLIPV GPAGAVLYRI AEYLARTWAR
PVDDRTVAFS SFAQRAFFVI DWVPARLTSL GFAIVGNFED AIYAWRNHAR QWPDANDGVL
LAAGSGALGA RLSGPLAEPS SLDALATGDG GPMQVGDDCT PRTLQSAVGL VWRAVVLWMI
LLLMLTIAVW LA
|
|---|
| |