| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2961 |
|---|
| Symbol | |
|---|
| ID | 6282292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3345200 |
|---|
| End bp | 3346027 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642622531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001896579 |
|---|
| Protein GI | 187924937 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0973815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.781678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC ACCTCACCCA ACTCGGGCTC GCGCTCTGCA CCGTGATGTG CGGCTTGAGC
GGAACAAGCG GCAGCGCCCA GGCGGCATCG GGCGCCGGCT CGCCGCCGTT GCCCGAATTT
CTCGCTTCTC ATGACAGCGG CTCCGCCGCC GTCAAGGTGC AGATGGTGGA CGACGACGTC
CTCGCCGGAC AGACCGGCAA ATATGCCGGC GCCACGATGA TCTCCGGCTT CGTTCTGAAC
ATCATCTCGC AATGGCAACT GCCCAACGGC GTGACCGCCG TCGCCCAGGG CACGCTCGGC
GCGGCGCAGA ACGCGCTCGG CCAGGTGACG ACCACCGTCA GCACGCTCGC GAGCGTGAGC
GGCGGCGGCC CCGGCAGCCA CACCAATGCC GCCAGTTCGG GAGCCGATCC CAACGCTCAC
GTCAATGGTG GCCAGAGCAT CACGGTCAAC GGCGTTTCAC AAGTGACCCA GGTGGCAGGC
GACCGTAACA GCGGCGCCAA TTCCGCGCTC ATCGATTTCA ATAACAACGC CGCGACGCTG
GCGGGCACCG CCAATGCCCC GTCAGCCACG GCCAGCAATT CGACCGGCTC CGTCAAAGCC
GGCATCTCGT TCGGCAGCAA CGGCATCAGT GTCGTGCTGC AGACGCCGGC TGGGCTCGCC
ACCCAGACGG TCACGCCGGG CAACGGGCAA ATCGCCCAGT TGCTGCAGAT CGCAGGCAAT
AGCCAGCAAG TCGCCAACGC ATTGCAGCTG CATTTGCAAA CTCAGCCAAT GTCGGCCTCG
ATGATCCGCC AGTTAGGCGT ACTACAAGCG CTGCAAAACA GGAGGTGA
|
|---|
| Protein sequence | MKQHLTQLGL ALCTVMCGLS GTSGSAQAAS GAGSPPLPEF LASHDSGSAA VKVQMVDDDV
LAGQTGKYAG ATMISGFVLN IISQWQLPNG VTAVAQGTLG AAQNALGQVT TTVSTLASVS
GGGPGSHTNA ASSGADPNAH VNGGQSITVN GVSQVTQVAG DRNSGANSAL IDFNNNAATL
AGTANAPSAT ASNSTGSVKA GISFGSNGIS VVLQTPAGLA TQTVTPGNGQ IAQLLQIAGN
SQQVANALQL HLQTQPMSAS MIRQLGVLQA LQNRR
|
|---|
| |