Gene Bphyt_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2953 
Symbol 
ID6282103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3335330 
End bp3337945 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content71% 
IMG OID642622523 
Productputative prolin-rich transmembrane protein 
Protein accessionYP_001896571 
Protein GI187924929 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3115] Cell division protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAG TCACCCCACA CCGCTATTCG AACCGCCGGG TTATCGGCTA TACGTTGATC 
GCAGCCGCCG CCTTCCTGCT GGCAGGCCAG GCCACCTTCG CGCAGGAAAT CGAGGAGGCG
CCGCAGAGCG CCGCCGCCAC GCAGAACACC GATCCGCCCG GCCGCGTCGC GCGCCTGAAC
TATACGGCGG GCGCCGTGAC CACCGAACCG GCCGGCGCTA CCGACTGGTC GTACGCGCAG
ATCAACCGCC CTCTCACCAC CGGCGACCAG TTGTGGAACG ATCAGAACGC CCGCTCGGAG
CTCCACATCG GTTCGACCGC GGTGCGCCTC GGATCGTCCA CAAGTCTCGA TCTGCTCAAT
CTCGACGACA ACAGCGCCCA GCTCAAAGTC GCGCAGGGCA CGCTGTCGGC GCGCGTGCGC
GAGCTCGCGC CGGGTTCGTC CTATGAGATC GATACGCCGA ATCTCGCGCT CGGTCTCAAC
GGTCCCGGCG ACTACCGCGT CGACGTCGCG CCGGACGGCA GCAGCACGAC CGTCACCGTG
CGCAGCGGCG GCGCGACGGT GTACGGCGAC AGCGGCCAGG TGCCGGTCGC GGCCGGCCAG
CAAATCCGCT TTGGCGGCAC CAACCTGCAA CAGCTCGCCG ACAACGGCGT ACCCGGCCTC
GACGCCTTCG ATCAGTGGGC CGCCGGCCGC GACGCTGCGG AAGACCGCTC GGTGTCGGCG
CGCTACGTGT CGCGCGACAT TCCCGGCTAC CAGGACCTCG ACGCTAACGG CACATGGCAA
AGCTCGCCGC AATACGGCGA AGTGTGGGTG CCGCGCGGCA CGTCCGCCGG CTGGGCGCCC
TATCGCGACG GCCACTGGGT CTGGCAGGCG CCGTGGGGCT GGACCTGGGT CGACGACGCG
CCGTGGGGCT TCGCGCCCTA CCACTACGGC CGCTGGGCGC AGGTCGACGA CACGTGGGCA
TGGGTGCCGG GACCGGTCGC GGTCAGCGAG CCGCCCGTCT ACGCGCCGGC GCTCGTCGCT
TTCGTGGGCG GCGGTGGCGG CGGCGTGAAC TGGGGTGTGG ATCTGGCGAT CGGCGGAGCG
GTCGCCGCCG GCGTCGCGTG GTTCCCGCTC GGGCCGGGCG AGCCGTGGCA TCCGCATTGG
GGCGGTCACG ATCACTGGAG TCCCGGCTAC TACAACCGCG TCAACCAGAC GACGATCGTC
AACAACTACA ACCGCAATGT GAATGTGACC AACATTCACA ACACGTACAT CAACTACCGC
GCTCCGGGCG CCGTGACCGC GGTGCCCGCG ACGGCCTTCG TGCACGGACA GCCGGTCGGG
CGCTTTGCCC AGAAGGTCGA TCCGCGGCAA TGGCGCAACG CGCAGATCAA CCCGGGCGGT
CCGGGCATCG CGCCGGTGCG GGAGAGTTTC GGGCCGGGCC AGCGCAACGC GAATTACCGG
CCGCCGGCGG CGGTGATGAC GCGTCCGGTG GTGGCGACGC GTAGTCCGGC GATGCCGGCG
GCCTATCACG ACAGCCTCGC GCAGCGTTTC GCGCAAAGCG GCGGACGAGT GCCGGGCGGC
GGTCAGCCGA TCGTGCGGAC CTCGGTGCCG GCGCACATGG CGGGCGGACC GAGCGCGCTG
CCCGTGCAGA ACGTGCGGGT CGTGCAGTCG CATATCGCCG GACGTGCGCC GGGCATGGCA
GCGGGCGCAC TGGGTGGACC GAATGGGATG CAGCAGCGGC CGGGCGAAGC ACCGCGCGGT
GGAGAGCAGC AAGCACGCCC AGGGATGCCG CCGGGTGCGC CGGGCGGAGC GGGCGCTATG
CAACAGCAGG CCGCTCAGCG GCCGGGTGAA ACACCGCATG GCGGCGAACC GCAAGCGCGG
CCGGGCATGG CGCCGCAGAT GGCCAATCAG CGGCCGCAGG CTGGGGAGGC GGGGCACCCG
TCGAACGGTG TGCCGCGTCC GCCGCAAGCG AACGGTGGCA ATCACGCGGG GTTTGCGCAG
CAGCAACAGC AGCAGCCGCA GCGGGGAATG CCGCAGCAGG CGGGGCAGCA GCCGGGCGTG
AACGAGCGGC ACGAGCCCGC CTGGACTCAA CCGCACACGC CGATGGCGCA GCAAGCCCAA
CAGCGTGGCG GCCCGCAGCC GCAGGCTGGA CGCCCGGAGT TCGCGCAACA GCCCGGCGCG
GCGCGTCCCG GGGAAAATCC GGCGGCCCAG CAGCAACAGC AGCAGGCGCG TCAGCAGGAA
ATTCGGCCGC AGCCGCAGCA ACAGGCTCAA CTGCAGCGTC AGCCCGAGCC GCAGGCGCAG
CGTCCGGCGG AAACCCAGGC GCAGCAACAG CCGCGTCAGG AATATCATCC GCAGCCCGTG
CAGCAGCCGA TGCAGCAGCC GCGTCAGGAA CCGCGTCAGC AGCAGGCGCA GCAGCAACCT
CGGCCGGAGT TTCATCCGCA GCCGCAGCCT CAACAGCAGC CGCACCAGCA GCAGGCGCAA
CAACAGCCCC GGCCGGAGTT TCATCCGCAG CCGCAACAGC AGCCGCGCCA GGAACCGCGT
CCGCAGCAGG CGCAGCAGCC GCGTCCTCAG GCACAGCCGC AGCACGGCGA CCAGCATTCG
GGCGGCGGCA ACCATGACGA GCATCGGAAA AGCTGA
 
Protein sequence
MRTVTPHRYS NRRVIGYTLI AAAAFLLAGQ ATFAQEIEEA PQSAAATQNT DPPGRVARLN 
YTAGAVTTEP AGATDWSYAQ INRPLTTGDQ LWNDQNARSE LHIGSTAVRL GSSTSLDLLN
LDDNSAQLKV AQGTLSARVR ELAPGSSYEI DTPNLALGLN GPGDYRVDVA PDGSSTTVTV
RSGGATVYGD SGQVPVAAGQ QIRFGGTNLQ QLADNGVPGL DAFDQWAAGR DAAEDRSVSA
RYVSRDIPGY QDLDANGTWQ SSPQYGEVWV PRGTSAGWAP YRDGHWVWQA PWGWTWVDDA
PWGFAPYHYG RWAQVDDTWA WVPGPVAVSE PPVYAPALVA FVGGGGGGVN WGVDLAIGGA
VAAGVAWFPL GPGEPWHPHW GGHDHWSPGY YNRVNQTTIV NNYNRNVNVT NIHNTYINYR
APGAVTAVPA TAFVHGQPVG RFAQKVDPRQ WRNAQINPGG PGIAPVRESF GPGQRNANYR
PPAAVMTRPV VATRSPAMPA AYHDSLAQRF AQSGGRVPGG GQPIVRTSVP AHMAGGPSAL
PVQNVRVVQS HIAGRAPGMA AGALGGPNGM QQRPGEAPRG GEQQARPGMP PGAPGGAGAM
QQQAAQRPGE TPHGGEPQAR PGMAPQMANQ RPQAGEAGHP SNGVPRPPQA NGGNHAGFAQ
QQQQQPQRGM PQQAGQQPGV NERHEPAWTQ PHTPMAQQAQ QRGGPQPQAG RPEFAQQPGA
ARPGENPAAQ QQQQQARQQE IRPQPQQQAQ LQRQPEPQAQ RPAETQAQQQ PRQEYHPQPV
QQPMQQPRQE PRQQQAQQQP RPEFHPQPQP QQQPHQQQAQ QQPRPEFHPQ PQQQPRQEPR
PQQAQQPRPQ AQPQHGDQHS GGGNHDEHRK S