Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2953 |
Symbol | |
ID | 6282103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3335330 |
End bp | 3337945 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642622523 |
Product | putative prolin-rich transmembrane protein |
Protein accession | YP_001896571 |
Protein GI | 187924929 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG3115] Cell division protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAG TCACCCCACA CCGCTATTCG AACCGCCGGG TTATCGGCTA TACGTTGATC GCAGCCGCCG CCTTCCTGCT GGCAGGCCAG GCCACCTTCG CGCAGGAAAT CGAGGAGGCG CCGCAGAGCG CCGCCGCCAC GCAGAACACC GATCCGCCCG GCCGCGTCGC GCGCCTGAAC TATACGGCGG GCGCCGTGAC CACCGAACCG GCCGGCGCTA CCGACTGGTC GTACGCGCAG ATCAACCGCC CTCTCACCAC CGGCGACCAG TTGTGGAACG ATCAGAACGC CCGCTCGGAG CTCCACATCG GTTCGACCGC GGTGCGCCTC GGATCGTCCA CAAGTCTCGA TCTGCTCAAT CTCGACGACA ACAGCGCCCA GCTCAAAGTC GCGCAGGGCA CGCTGTCGGC GCGCGTGCGC GAGCTCGCGC CGGGTTCGTC CTATGAGATC GATACGCCGA ATCTCGCGCT CGGTCTCAAC GGTCCCGGCG ACTACCGCGT CGACGTCGCG CCGGACGGCA GCAGCACGAC CGTCACCGTG CGCAGCGGCG GCGCGACGGT GTACGGCGAC AGCGGCCAGG TGCCGGTCGC GGCCGGCCAG CAAATCCGCT TTGGCGGCAC CAACCTGCAA CAGCTCGCCG ACAACGGCGT ACCCGGCCTC GACGCCTTCG ATCAGTGGGC CGCCGGCCGC GACGCTGCGG AAGACCGCTC GGTGTCGGCG CGCTACGTGT CGCGCGACAT TCCCGGCTAC CAGGACCTCG ACGCTAACGG CACATGGCAA AGCTCGCCGC AATACGGCGA AGTGTGGGTG CCGCGCGGCA CGTCCGCCGG CTGGGCGCCC TATCGCGACG GCCACTGGGT CTGGCAGGCG CCGTGGGGCT GGACCTGGGT CGACGACGCG CCGTGGGGCT TCGCGCCCTA CCACTACGGC CGCTGGGCGC AGGTCGACGA CACGTGGGCA TGGGTGCCGG GACCGGTCGC GGTCAGCGAG CCGCCCGTCT ACGCGCCGGC GCTCGTCGCT TTCGTGGGCG GCGGTGGCGG CGGCGTGAAC TGGGGTGTGG ATCTGGCGAT CGGCGGAGCG GTCGCCGCCG GCGTCGCGTG GTTCCCGCTC GGGCCGGGCG AGCCGTGGCA TCCGCATTGG GGCGGTCACG ATCACTGGAG TCCCGGCTAC TACAACCGCG TCAACCAGAC GACGATCGTC AACAACTACA ACCGCAATGT GAATGTGACC AACATTCACA ACACGTACAT CAACTACCGC GCTCCGGGCG CCGTGACCGC GGTGCCCGCG ACGGCCTTCG TGCACGGACA GCCGGTCGGG CGCTTTGCCC AGAAGGTCGA TCCGCGGCAA TGGCGCAACG CGCAGATCAA CCCGGGCGGT CCGGGCATCG CGCCGGTGCG GGAGAGTTTC GGGCCGGGCC AGCGCAACGC GAATTACCGG CCGCCGGCGG CGGTGATGAC GCGTCCGGTG GTGGCGACGC GTAGTCCGGC GATGCCGGCG GCCTATCACG ACAGCCTCGC GCAGCGTTTC GCGCAAAGCG GCGGACGAGT GCCGGGCGGC GGTCAGCCGA TCGTGCGGAC CTCGGTGCCG GCGCACATGG CGGGCGGACC GAGCGCGCTG CCCGTGCAGA ACGTGCGGGT CGTGCAGTCG CATATCGCCG GACGTGCGCC GGGCATGGCA GCGGGCGCAC TGGGTGGACC GAATGGGATG CAGCAGCGGC CGGGCGAAGC ACCGCGCGGT GGAGAGCAGC AAGCACGCCC AGGGATGCCG CCGGGTGCGC CGGGCGGAGC GGGCGCTATG CAACAGCAGG CCGCTCAGCG GCCGGGTGAA ACACCGCATG GCGGCGAACC GCAAGCGCGG CCGGGCATGG CGCCGCAGAT GGCCAATCAG CGGCCGCAGG CTGGGGAGGC GGGGCACCCG TCGAACGGTG TGCCGCGTCC GCCGCAAGCG AACGGTGGCA ATCACGCGGG GTTTGCGCAG CAGCAACAGC AGCAGCCGCA GCGGGGAATG CCGCAGCAGG CGGGGCAGCA GCCGGGCGTG AACGAGCGGC ACGAGCCCGC CTGGACTCAA CCGCACACGC CGATGGCGCA GCAAGCCCAA CAGCGTGGCG GCCCGCAGCC GCAGGCTGGA CGCCCGGAGT TCGCGCAACA GCCCGGCGCG GCGCGTCCCG GGGAAAATCC GGCGGCCCAG CAGCAACAGC AGCAGGCGCG TCAGCAGGAA ATTCGGCCGC AGCCGCAGCA ACAGGCTCAA CTGCAGCGTC AGCCCGAGCC GCAGGCGCAG CGTCCGGCGG AAACCCAGGC GCAGCAACAG CCGCGTCAGG AATATCATCC GCAGCCCGTG CAGCAGCCGA TGCAGCAGCC GCGTCAGGAA CCGCGTCAGC AGCAGGCGCA GCAGCAACCT CGGCCGGAGT TTCATCCGCA GCCGCAGCCT CAACAGCAGC CGCACCAGCA GCAGGCGCAA CAACAGCCCC GGCCGGAGTT TCATCCGCAG CCGCAACAGC AGCCGCGCCA GGAACCGCGT CCGCAGCAGG CGCAGCAGCC GCGTCCTCAG GCACAGCCGC AGCACGGCGA CCAGCATTCG GGCGGCGGCA ACCATGACGA GCATCGGAAA AGCTGA
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Protein sequence | MRTVTPHRYS NRRVIGYTLI AAAAFLLAGQ ATFAQEIEEA PQSAAATQNT DPPGRVARLN YTAGAVTTEP AGATDWSYAQ INRPLTTGDQ LWNDQNARSE LHIGSTAVRL GSSTSLDLLN LDDNSAQLKV AQGTLSARVR ELAPGSSYEI DTPNLALGLN GPGDYRVDVA PDGSSTTVTV RSGGATVYGD SGQVPVAAGQ QIRFGGTNLQ QLADNGVPGL DAFDQWAAGR DAAEDRSVSA RYVSRDIPGY QDLDANGTWQ SSPQYGEVWV PRGTSAGWAP YRDGHWVWQA PWGWTWVDDA PWGFAPYHYG RWAQVDDTWA WVPGPVAVSE PPVYAPALVA FVGGGGGGVN WGVDLAIGGA VAAGVAWFPL GPGEPWHPHW GGHDHWSPGY YNRVNQTTIV NNYNRNVNVT NIHNTYINYR APGAVTAVPA TAFVHGQPVG RFAQKVDPRQ WRNAQINPGG PGIAPVRESF GPGQRNANYR PPAAVMTRPV VATRSPAMPA AYHDSLAQRF AQSGGRVPGG GQPIVRTSVP AHMAGGPSAL PVQNVRVVQS HIAGRAPGMA AGALGGPNGM QQRPGEAPRG GEQQARPGMP PGAPGGAGAM QQQAAQRPGE TPHGGEPQAR PGMAPQMANQ RPQAGEAGHP SNGVPRPPQA NGGNHAGFAQ QQQQQPQRGM PQQAGQQPGV NERHEPAWTQ PHTPMAQQAQ QRGGPQPQAG RPEFAQQPGA ARPGENPAAQ QQQQQARQQE IRPQPQQQAQ LQRQPEPQAQ RPAETQAQQQ PRQEYHPQPV QQPMQQPRQE PRQQQAQQQP RPEFHPQPQP QQQPHQQQAQ QQPRPEFHPQ PQQQPRQEPR PQQAQQPRPQ AQPQHGDQHS GGGNHDEHRK S
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