| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2950 |
|---|
| Symbol | |
|---|
| ID | 6282040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3332684 |
|---|
| End bp | 3333940 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642622520 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001896568 |
|---|
| Protein GI | 187924926 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCGT CCGCCGCTTC CACCGTTCCA GCCCATGCAC CCGGCCTGCG CGACACCGAT
CCGCACGACC GGCGTGCCGC GCGCGTGCTC GCCGTGTGCC AGGCGCTGTA CACCTCGTCG
GTATCGATCG ATCTGACGCT GACCGGTCTG GTCGGCTATA CGCTTGCCGA CGACAAAGCG
CTCGCCACGC TGCCGTTCTC GCTGATCACC GTCGCCGCCG CGCTGACGAC GATCTTCGCG
TCGTTCCTGA TGGCGCGCAT CGGCCGCCGC GCGGGCTTCG TGCTCGGCGC GGGCGTCGGC
GCGCTAGGCG GCGCGATTTC GGTGTGGGCG ATCTTTCACC ACAGTTTCTG GGCCTTCTGC
GCCGGCACGT CGACAGTCGG CGTGTTCCAG GCGTTCGCGC AGTATTACCG GCTGGCCGCC
GCCGACGCGG TCGGCATCGA CGATAAAAGC CGCGCGATTT CGACCGTGCT GGCGGGCGGC
GTGGTGGCCG CCGTTTGCGG GCCGCTGCTT GCCGCGTGGA GCAAGGACTG GCTGGCGCCG
GTCGCATTCG CGGGTTCGTA TGCGCTGGTA ACGGGCTTCG GGCTTTTATC GATAGCGTTG
CTAACGCTGC TGTATCGCGA CGCGGCTCCC ACCGCGAGCA CGGCGGCGAC TCACGAGGCG
GCGCGGCCGC TCGGCGAGAT CGTGCGGCAG CCGATCTTCG CGGCGGCGCT CGCCAACAAC
GCGCTCGGCT ACGCTGTGAT GATGTTCGTG ATGACCGCGA CGCCGATCGC CGCGGTCGCC
TGCGGCCACA CGATCGGCGA CGGCGCGCAG GTCATCCAGT GGCACCTGGT CGGCATGTTC
GCGCCGTCGC TCTTTTCCGC ACGGCTGATC AAACACTTCG GCGTGCTGCG GGTGATCGGC
GCGGGCATTG CGCTCTCGGC GCTGTGCGGC GTACTCGCGT TGCGTTCAAC CGATCTGCCG
CATTTCTACG CGGCGCTCGC CTGTCTTGGC GTGGGCTGGA ATTTCATGTT CGTCGGCGGC
TCGACGCTGC TCGCGCAATC GTACCGGCCG TCGGAGCGGG CCAAGACGCA GGCCACCAGC
GAGTTCACGA CGTTCGCGTT TTCCGCGCTG GGGTCGCTGT TCGCCGGTCA ATTGCTGGCC
CGCTTCGGCT GGGCGACGAT CAATGCCGCG ATATTTCCGC TGCTTGCGGC GGCGGCGCTG
GCCACGCTCG GGTACGCGTG GTCGCGCAAG CGGCGGTTAA TGGCGGAGGT GTCCTGA
|
|---|
| Protein sequence | MPPSAASTVP AHAPGLRDTD PHDRRAARVL AVCQALYTSS VSIDLTLTGL VGYTLADDKA
LATLPFSLIT VAAALTTIFA SFLMARIGRR AGFVLGAGVG ALGGAISVWA IFHHSFWAFC
AGTSTVGVFQ AFAQYYRLAA ADAVGIDDKS RAISTVLAGG VVAAVCGPLL AAWSKDWLAP
VAFAGSYALV TGFGLLSIAL LTLLYRDAAP TASTAATHEA ARPLGEIVRQ PIFAAALANN
ALGYAVMMFV MTATPIAAVA CGHTIGDGAQ VIQWHLVGMF APSLFSARLI KHFGVLRVIG
AGIALSALCG VLALRSTDLP HFYAALACLG VGWNFMFVGG STLLAQSYRP SERAKTQATS
EFTTFAFSAL GSLFAGQLLA RFGWATINAA IFPLLAAAAL ATLGYAWSRK RRLMAEVS
|
|---|
| |