Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2936 |
Symbol | |
ID | 6281001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3317771 |
End bp | 3318532 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642622506 |
Product | AzlC family protein |
Protein accession | YP_001896554 |
Protein GI | 187924912 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000187359 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCCATT CCACCGCAGG CCGGCCCACG AGCCCAAGCC ATTTCAAAGA GTTCACCGCA GGCGCGCGCG ACATCATCCC GATGATGGTC GGCGCGGCCC CTTTCGGCGT CATTTTCGGC ACTCTCGTCG CATCCGGCCC GTTGCATCTA TGGCACGGCC AGTTGATGTC GCTCGTCGTG TTCGCCGGCT CCGCGCAGTT CATCGCGCTC GGCCTGATTG CCGGACACGC GAGTTTTGCC GTCGTCTGGG CGACCACGCT CGTCGTTAAT CTGCGCCATG TGCTGTACAG CGCCACGCTC GCCCCGCACG TCGCGCATCT GCCGGCACGC TGGCGCTGGG TGCTCGGCGC GCTGCTCACC GACGAAGTTT TCGCCGTCGC GTGGGAACAC TACCGGCATC GGGAGCCCGG CACGGTCGGG CCGCATTACT TCTTCGGCGC CGGCTTGGCC ATGTATCTGA ACTGGCAGCT CTGGACCGCC GCCGGCCTGC TGTTCGGCGC GGCTTTCCCG GACCTGCAAT CGCTCGGCCT CGATTTCGCC ATGGTCGCCA CGTTCATCGC GATCGTCGTG CCGCAACTCG TCGCGCTGCG CTACATCGCG GCGGCCGTCA CCTCGGGCAT GCTGGCCTTC TTCTGGCAGG CGTGGCCGTA CAAACTCGGT TTGCTTGGCG CGGTGTTCGC GGGCGTGGCG ATCGGCGTGC TGCTGTCGAC GTCGCGGCCC AACCTGCGCG GCAACGGCAA AACCGCGGAG GCATCGCGAT GA
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Protein sequence | MTHSTAGRPT SPSHFKEFTA GARDIIPMMV GAAPFGVIFG TLVASGPLHL WHGQLMSLVV FAGSAQFIAL GLIAGHASFA VVWATTLVVN LRHVLYSATL APHVAHLPAR WRWVLGALLT DEVFAVAWEH YRHREPGTVG PHYFFGAGLA MYLNWQLWTA AGLLFGAAFP DLQSLGLDFA MVATFIAIVV PQLVALRYIA AAVTSGMLAF FWQAWPYKLG LLGAVFAGVA IGVLLSTSRP NLRGNGKTAE ASR
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