| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2929 |
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| Symbol | |
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| ID | 6280958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3310268 |
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| End bp | 3311257 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622497 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001896547 |
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| Protein GI | 187924905 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.501657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.548764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGA TCCTCGTCGC CCGTCCGATC TTTCCCGATG TGATCGAACG GCTCAAACAA
TATTTCGACG TCGACTGGAA TCAGGGCGAC GTGTTGGCCG CCGACGAACT GAAGCGCCGT
CTCGCGGATA AAGACGGCGC CCTGACCGCG GGCGACCCGG TCGGTGCCGC CGAGCTCGCG
GCGGCGCCGC GTCTGCGTGT GGTGTCGAAT ATGGCGGTGG GCTACAACAA CTTCGACGTG
GCCGCTTTCA ACGCGGCCAA CGTGCTCGGC ACGAACACGC CGGACGTGTT GAACGAATCG
ACAGCGGACT TCGGCTGGGC GTTGATGATG GCGGCGGCGC GCCGCATCAC CGAATCGGAG
CACTGGCTGC GCGGGGGCCA ATGGCAGAAG TGGGCGTATG ACGCGTTCCT CGGCAGCGAT
TTGCACGGCT CGACGCTCGG CGTGATCGGC ATGGGCCGTA TTGGCCAGGC GCTCGCGCGT
CGCGCGAAGG GCTTCGACAT GCAGGTGATT TATCACAATC GTTCGCGCGT GGCGCCCGAG
ATCGAGGCTG AGTTGAACGC GGAGTATGTA TCGAAGCAGG ACCTGTTGCG GCGTGCGGAT
CACGTCGTGC TCGTACTGCC GTACACGAAG GAGAACCATC ACACGATCGG AGCGGCTGAA
CTCGCGCTGA TGAAACCGAC CGCGACGCTT ACGAATATCG CGCGAGGCGG CATCGTCGAT
GACGCAGCGC TGGTCGAAGC ATTACGCTCG AAGCAGATTG CCGCCGCTGG TCTCGATGTG
TTCGAAGGCG AGCCCAATCT GAATCAGGAT CTGCTCAGCG TACCGAATGT CGTGCTGACG
CCGCACATTG CCAGCGCGAC TGAAGCCACG CGCCGCGCCA TGGCGAATCT CGCCGCGGAC
AATCTGATCG CGGGCCTGGG CGAAGGTCCG CGCGCGGGGC GGCCGCCGAA CCCGGTCAAC
CCCGAGGTCA TCGGCAAGGC GCGTTCATGA
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| Protein sequence | MQKILVARPI FPDVIERLKQ YFDVDWNQGD VLAADELKRR LADKDGALTA GDPVGAAELA
AAPRLRVVSN MAVGYNNFDV AAFNAANVLG TNTPDVLNES TADFGWALMM AAARRITESE
HWLRGGQWQK WAYDAFLGSD LHGSTLGVIG MGRIGQALAR RAKGFDMQVI YHNRSRVAPE
IEAELNAEYV SKQDLLRRAD HVVLVLPYTK ENHHTIGAAE LALMKPTATL TNIARGGIVD
DAALVEALRS KQIAAAGLDV FEGEPNLNQD LLSVPNVVLT PHIASATEAT RRAMANLAAD
NLIAGLGEGP RAGRPPNPVN PEVIGKARS
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