Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2922 |
Symbol | |
ID | 6281685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3301267 |
End bp | 3304560 |
Gene Length | 3294 bp |
Protein Length | 1097 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622490 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_001896540 |
Protein GI | 187924898 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000705961 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.54344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TGTTGTTCAA CGCAACGCAG CAGGAAGAAC TGCGCGTCGC CATCGTCGAT GGGCAAAAAC TCATCGATAT CGACATCGAA ACCGCCGGGC GCGAACAGCG CAAAGGCAAC ATTTACAAGG GCATCATTAC TCGCATCGAG CCGTCGCTCG AAGCCTGTTT CGTCAACTAC GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA TTTCCGCGAC GGCGTCGACA TGCGTTCCGC GCGCATCCAG GACGCGCTGC GTGAAGGCCA GGAACTGATC GTTCAGGTCG AAAAAGAAGA ACGCGGCAAT AAGGGCGCGG CCCTCACCAC GTTCATCTCG CTCGCCGGCC GCTATCTGGT CCTGATGCCG AACAATCCGC GCGGCGGCGG CGTGTCGCGC CGGATCGAAG GCGACGACCG TCAGGAACTG CGCGAAACCA TGGCGCAGCT GCAACTGCCG GAAGGCATGA GCATCATCGC GCGCACGGCC GGCATCGGCC GCAGCGCCGA AGAACTGCAA TGGGACCTGA ACTACCTGAT GCAACTGTGG CGCGCTATCG AAGCCGCGTC GCAAAGCGGT TCGAGCGGTC AGCCGATGCT GATCTATCTC GAATCCAGCC TCGTGATCCG CGCGATCCGC GACTACTTCC AGCCGGACAT CGGCGAAATT CTGATCGACA CCACTGAAAT TCATGACCAG GCCCGCGCCT TCATGGATAT CGTGATGCCG GATAATGTCA GCAAGGTGAA GCGGTATCAC GACGATGTAC CGCTCTTCTC GCGTTTCCAG ATCGAACACC AGATCGAAAC GGCGTATTCG CGCACCGTGC CGCTGCCCTC GGGCGGCGCG ATCGTGATCG ATCACACCGA AGCGCTGGTC GCGATCGACG TGAACTCGGC GCGCGCCACC AAGGGCGCCG ACATCGAAGA AACGGCCGCG CGCACCAACC TCGAAGCCGC CGACGAAGTC GCCCGCCAGC TGCGTCTGCG CGACCTGGGC GGCCTGATCG TGATCGACTT CATCGACATG GAGTCCGCCA AGAGCCAGCG CGAAGTCGAG CAACGCCTGA AAGACGCCCT CAAGCACGAC CGCGCGCGCG TCCAGATGGG CAAGATCTCT CGTTTCGGCC TGATGGAACT GTCGCGTCAG CGTCTGCGTC CGGCGCTCTC GGAAGGCAGT CACGTGACCT GCCCGCGCTG TAACGGCACG GGCCACATCC GCGATACCGA ATCGTCCGCG CTGCAAGTGC TGCGGATCAT TCAGGAAGAG GCAATGAAGG AAAACACCGC GGCAATTCAC TGCCAGGTGC CGGTCGAAGT GACCGCCTTC CTGTTGAACG AAAAGCGTGC CGAGATCAAC AAGATCGAGT CGCGTTTCAA GGTCAACGTC GTGCTGATCC CGAACAAGCA CCTCGATACG CCGCATTACA AGCTCGAGCG TCTGCGTCAC GACGACGCGC GCCTCGACGA CCCGCGCGCT TCGTGGAAGA TGGCCGAAGA AGCGGCCCGC GAACTGGAAT CGGAAACCGG TTACAGCAAG CGTACCGAAG AAGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCTGAAAAG CCGGCGCCGA GCGCGCCTGT GCGCCCGGTC GCGGCCCCCG CTCCGGTCGC GGTTACGCCG GCGAGCGGCG GCTTCATCGG CTGGTTGAAG AATCTGTTCG GCGTGCAGCC GGCCGCTCCG GCGCCCGTCG CGCCTGCAGC GACCGATAAG CAGGCGCGTC CGCAACGCGG CGAACGCACG GAACGCGGTG AGCGCACCGG CGAACGCGGC GGCGATCGCA ACCGCAATCG CCGCACTGGC ACGGGCACTC GCGATGCAGC GGGCCGTGGC GAAGGCACGA CCGGCGGCCG TCAAGCCCAA GGTCAGCAGC CGTCGCAACG CCGCGAAGAA CGCGAGCCGC GTGAAGGCCG TGAAACACGC GAAGGCCGCG AGCCGCGCGA AGCACGGGAA GCGCGTGAAC CGCGTGGCAA CCGTGAGCCG CGTGAAGCCC GCGAAGGCCG TGAACCGCGC GAGGCCCGTG AGCCACGCGA GGGTCGTGAA AATCGTGACC GCGACAATCG CGGTGCCGAG CGCGCGGAAA CGGCGGAAGC CGCACCGCGT GGCGAACGTC AGGAGCGCGG CGAGCGCCGT GAACGTGGCG AGCGCGCGGA ACGAGGTGAA CGCCGCAAGC CGCAAACGGA AACCGCGGAC GCATTGACGC AAAGCGAAGC GCAAACGGCG GAAGAACTGG TGCAAAACCA GACCGCTTTG GGCGAAAACG GCGCGCCGAT CGATCAGGAA GCAGTGGCGC GTGAAGGCGA AGAGCGTCGT CGTCGCCGTC GCGGCCGTCG CGGTGGCCGT CGTGAGCGTG AAGAGGACGT GAATGGCAAT CTGGCGGCGG ACGTCGCAGA AGCTGAAGGC GACAATGCAA GCGCAACCGA CGAAGCGCCT GTGCGCACGG CGCATCAGCC GGTCGAGCGC AAGCCGGAAG TCGTCGAGGC GAAGGACGTG ACGCCGGTCG AAGTAGTGGT CGCTGCTGTC GCGACGCAAA CCGCCGTTGT GACCGAACTG CACGCCGCAA CCGAAACGCC GGCTCTGGCC GTCGAAAAGG CTGCGAAGAC GGAAACGGTA GTACCGGTCG CGGAAGCGCC GGTTGCGCCG GCAGTCGTCG AGCCGGTCGC CGAAACGCCG GTGGCGCAAG CCGCTGCGGA GCCCGTCGAA GCAGCGCAAG CGGCGCCGGC CGCCAGCGAA ACGGTTTCGC TGGTTGAACC GGTCGCACGC GTCGAAGCCC CGGCTCATGC GCACGTCGAA GCGCCTGCGG TTGCGCCGGT TGTCGAAGCG CAAGCCGCTG CTCCGGCTCC GGCTCCGGTC GAAACCGCGG CTCCGGCTGT GGCAATCGAA GCGCCTGTTG CTCAACCTGC ACGGCAGGCT GAGATCGTCG AACCGCAGCC GGTCGTGGCA GCGGTCGCAC CGGCACCTGA ACCGGCTGCT GTCGAGCCGG CGCCCCTCGC CGTCGCACCG CAAGCTGCGC CGCAAGCGCC GCGTCAAGCC GCCGTGTCGG CGGAAGCCCT GAAGCCGGTG CTGGAACAAG CCGGCCTCGT CTGGGTGAAC ACCGACGCCG ACAAGCTGCG CGCGGCTCAG GAAGTTGCTG CACAGACCGT CAAACCGGCT CGCGTGGCTC GCGAACGCAA GCCGCTGCCG CCGCTCGACA GCGCGCCAAT GCAACAGGTG GAAACAGGCC AGCACCCGCA GTAA
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Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGIITRIE PSLEACFVNY GEDRHGFLPF KEVARQYFRD GVDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS LAGRYLVLMP NNPRGGGVSR RIEGDDRQEL RETMAQLQLP EGMSIIARTA GIGRSAEELQ WDLNYLMQLW RAIEAASQSG SSGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV AIDVNSARAT KGADIEETAA RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRAEIN KIESRFKVNV VLIPNKHLDT PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RTEEVKPKQE AAVKGITPEK PAPSAPVRPV AAPAPVAVTP ASGGFIGWLK NLFGVQPAAP APVAPAATDK QARPQRGERT ERGERTGERG GDRNRNRRTG TGTRDAAGRG EGTTGGRQAQ GQQPSQRREE REPREGRETR EGREPREARE AREPRGNREP REAREGREPR EAREPREGRE NRDRDNRGAE RAETAEAAPR GERQERGERR ERGERAERGE RRKPQTETAD ALTQSEAQTA EELVQNQTAL GENGAPIDQE AVAREGEERR RRRRGRRGGR REREEDVNGN LAADVAEAEG DNASATDEAP VRTAHQPVER KPEVVEAKDV TPVEVVVAAV ATQTAVVTEL HAATETPALA VEKAAKTETV VPVAEAPVAP AVVEPVAETP VAQAAAEPVE AAQAAPAASE TVSLVEPVAR VEAPAHAHVE APAVAPVVEA QAAAPAPAPV ETAAPAVAIE APVAQPARQA EIVEPQPVVA AVAPAPEPAA VEPAPLAVAP QAAPQAPRQA AVSAEALKPV LEQAGLVWVN TDADKLRAAQ EVAAQTVKPA RVARERKPLP PLDSAPMQQV ETGQHPQ
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