| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2919 |
|---|
| Symbol | |
|---|
| ID | 6281682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3298459 |
|---|
| End bp | 3298863 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622487 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_001896537 |
|---|
| Protein GI | 187924895 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00744341 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG CTGCCACCCA GGAGCAAGCG GAGGCGGTTC GCGTCTGCGC GTCGGACGAA
CTGGTCGACG GTGGCGCGGG CGTGCGGCAC GCGGCGAAGC TCGGTGGCGG CGACGTCGTC
GTGTTCTTCG TTCGGTACGA TGGCCGCGCC TACGGCTACC TGAACCGTTG CGCCCACGTA
CCGATGGAGC TGGACTGGGC CGAAGGGCAG TTCTTCGAAT CGTCCGGTTT ATACTTGATG
TGCGCTACAC ATGGCGCGAT TTACGCGCCG GATACGGGCA AATGCGTCGG TGGTCCGTGC
CGCGGCGGCA AATTGCGGCC AGTCCAGGTG GACGAGCGCG ACACGCCGGA AGGCCGAGCC
GTATTCTGGC TGCCAGACGG CGAATTGCGT CCGGCCACAT CCTGA
|
|---|
| Protein sequence | MNTAATQEQA EAVRVCASDE LVDGGAGVRH AAKLGGGDVV VFFVRYDGRA YGYLNRCAHV
PMELDWAEGQ FFESSGLYLM CATHGAIYAP DTGKCVGGPC RGGKLRPVQV DERDTPEGRA
VFWLPDGELR PATS
|
|---|
| |