Gene Bphyt_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2917 
Symbol 
ID6281680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3296609 
End bp3297328 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID642622485 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_001896535 
Protein GI187924893 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.198508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CGCTCTATCT GATTCCGAAC ACGCTGGGCG AAGGCGACAC CGAGGCGCTC 
GACGCCGTCC TGCCCGCCCC GGTGCGCGCG CGTGCGGCGT CGCTTCACTA TTACATCGGC
GAAAACGCGA AAACCACGCG CGCTTTCCTA AAGAAAGTCG GCACGGAACG GCCGATCCAG
GAAATCGAGA TTCGCGAACT GAATGTGAAT ACACCGCCCG GCGAGATCGA CAAGCTGCTC
GCGCCGCTTC TTGCCGGCAC GGACGCGGGC CTTGTTTCCG AAGCCGGCTG TCCGGCGGTC
GCCGACCCCG GCGCCCTGCT GGTGCGCCGC GCGCATGAGC GCGGCGTGAA AGTCGTGCCG
TTCGTGGGCC CGAGTTCGAT CCTGCTGGCT TTGATGGCGT CGGGGCTCAA CGGGCAAAGC
TTTGCGTTCC ACGGCTACCT GCCGGTCGAT GCCACAGAGC GGGCCAAGCG TCTGCGAGAC
CTGGAGCAGC AGTCGCGCAA AGGCAAGCAA ACGCAGATCT TTATCGAGAC GCCCTATCGA
AATCGCGCGT TGCTGGATAC GCTGCTCGCG ACGTGCGCAC CTTCCACGCT CGTTTGTGTG
GCAGTGGATT TGACTCTGGA AACGGAAACT ATCGCAAGCC GCACCGTGGC CGACTGGAAG
AAAAAGCCGC CGATCGATCT GCACAAGCGG CCGGCTATAT TTCTGATTCT GGCCGTTTGA
 
Protein sequence
MSGTLYLIPN TLGEGDTEAL DAVLPAPVRA RAASLHYYIG ENAKTTRAFL KKVGTERPIQ 
EIEIRELNVN TPPGEIDKLL APLLAGTDAG LVSEAGCPAV ADPGALLVRR AHERGVKVVP
FVGPSSILLA LMASGLNGQS FAFHGYLPVD ATERAKRLRD LEQQSRKGKQ TQIFIETPYR
NRALLDTLLA TCAPSTLVCV AVDLTLETET IASRTVADWK KKPPIDLHKR PAIFLILAV