| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2903 |
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| Symbol | |
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| ID | 6284546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3284234 |
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| End bp | 3285751 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622471 |
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| Product | protease Do |
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| Protein accession | YP_001896521 |
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| Protein GI | 187924879 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.580104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.459508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT TCTCGGTGCG CAAATTCCTC GCGGCCGCGG TGGTAGCGGC TTGTTTGCCG
CTCGTGCCGC ATACGGCTTC GGCGGCATCG GCCGCCAATC TGCCCGATTT CACTGATCTG
GTTGACAAGG TCGGCCCGGC GGTCGTCAAC ATTCGCACGA CTACACGCGT GTCGAACAGC
GGAACTCGCG GCGGTTTGCC GCCGGGCATG GACGACGGCG ACATGTCGGA GTTTTTCCGG
CGCTTCTTCG GCATTCCGTT GCCGCAGTCG CCGCAATCTC CTGGCGCGCC CGGTTCGCCA
CGTGGCGGCG ACAACGGCGG CAGTGGCGGC AGTCAGGACT TGCCGGATAA CAGCGATGCC
GAGCAGAACA GCGGCGTCGG TTCCGGTTTC ATTCTGTCGG CGGACGGCTA CGTGATGACC
AACGCGCACG TCATCGACGA CGCGGACACC ATTTACGTCA CGCTCACCGA CAAGCGCGAA
TTCAAAGCGA AGCTGATCGG CGTGGACGAT CGGACCGACG TTGCCGTCGT GAAAATCAGC
GCCGCCAATC TGCCGACCAT CACGATCGGC GACTCGAATA AGGTGCGCGT GGGCGAATGG
GTCGTGGCGA TCGGCTCGCC GTTCGGTCTC GAGAACACGG TGACGGCCGG CATCGTCAGC
GCCAAGGGGC GCGATACGGG CGACTACCTG CCGTTTATCC AGACCGACGT GGCTGTCAAT
CCGGGCAATT CGGGCGGTCC GCTGATCAAT ATGCAGGGCG AGGTGATCGG CATCAACTCG
CAGATCTACA GTCGCACGGG CGGTTTCATG GGCATCTCGT TCGCGATTCC GATCGACGAG
GCCATGCGTG TGGCCGATCA ATTGAAGGCG TCGGGTAAGG TCGTGCGCGG CCGGATCGCG
GTAGCGATCG GCGAAGTGAC CAAAGACGTG GCCGACTCGC TTGGCCTGCC GAAGGCGCAG
GGAGCGCTGG TTAGCAGCGT CGAACCGGGC GGCCCGGCGG ATAAGGCCGG CGTGCAACCG
GGCGACATCA TCCTTAAGTT CAATGGCCAT TCGGTCGATA CGGCAACGGA TCTGCCGCGC
ATGGTTGGCG ACACCAAGCC GGGCACCAAG TCGACGATTA CGATCTGGCG CAAAGGCCAG
ACGCGCGATC TGCCGGTGAC GATCGCCGAA ATGCAGCCGG ATAAATCGGC CAAGGCGGAT
CAGAAGAAAC CGCAGCCGCC GAAGCAGCGC GCCACCAACG CGCTGGGTGT GGCCGTCAGC
GATATTCCTG CTGACCAACT GAAGGCGCTG AAACTGCGCA ACGGCGTGCA GATCGACGCC
GCGGACGGTC CCGCAGCGCG CGTCGGCTTG CAAAAGGGCG ACATTATCCT GCGGGTAGGC
GATACGGATA TCACCAGCGC GAAGCAGTTC GACGAGGTGA GTTCGCACCT CGATCCGCAG
AAGATGGTCG CGCTGCTGGT TCGCCGCGGC GAGAATACGC AGTTCGTGCC GGTCCGGCCA
CGCAGCGTGC AGAAATGA
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| Protein sequence | MTTFSVRKFL AAAVVAACLP LVPHTASAAS AANLPDFTDL VDKVGPAVVN IRTTTRVSNS
GTRGGLPPGM DDGDMSEFFR RFFGIPLPQS PQSPGAPGSP RGGDNGGSGG SQDLPDNSDA
EQNSGVGSGF ILSADGYVMT NAHVIDDADT IYVTLTDKRE FKAKLIGVDD RTDVAVVKIS
AANLPTITIG DSNKVRVGEW VVAIGSPFGL ENTVTAGIVS AKGRDTGDYL PFIQTDVAVN
PGNSGGPLIN MQGEVIGINS QIYSRTGGFM GISFAIPIDE AMRVADQLKA SGKVVRGRIA
VAIGEVTKDV ADSLGLPKAQ GALVSSVEPG GPADKAGVQP GDIILKFNGH SVDTATDLPR
MVGDTKPGTK STITIWRKGQ TRDLPVTIAE MQPDKSAKAD QKKPQPPKQR ATNALGVAVS
DIPADQLKAL KLRNGVQIDA ADGPAARVGL QKGDIILRVG DTDITSAKQF DEVSSHLDPQ
KMVALLVRRG ENTQFVPVRP RSVQK
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