Gene Bphyt_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2903 
Symbol 
ID6284546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3284234 
End bp3285751 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content63% 
IMG OID642622471 
Productprotease Do 
Protein accessionYP_001896521 
Protein GI187924879 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.580104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.459508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT TCTCGGTGCG CAAATTCCTC GCGGCCGCGG TGGTAGCGGC TTGTTTGCCG 
CTCGTGCCGC ATACGGCTTC GGCGGCATCG GCCGCCAATC TGCCCGATTT CACTGATCTG
GTTGACAAGG TCGGCCCGGC GGTCGTCAAC ATTCGCACGA CTACACGCGT GTCGAACAGC
GGAACTCGCG GCGGTTTGCC GCCGGGCATG GACGACGGCG ACATGTCGGA GTTTTTCCGG
CGCTTCTTCG GCATTCCGTT GCCGCAGTCG CCGCAATCTC CTGGCGCGCC CGGTTCGCCA
CGTGGCGGCG ACAACGGCGG CAGTGGCGGC AGTCAGGACT TGCCGGATAA CAGCGATGCC
GAGCAGAACA GCGGCGTCGG TTCCGGTTTC ATTCTGTCGG CGGACGGCTA CGTGATGACC
AACGCGCACG TCATCGACGA CGCGGACACC ATTTACGTCA CGCTCACCGA CAAGCGCGAA
TTCAAAGCGA AGCTGATCGG CGTGGACGAT CGGACCGACG TTGCCGTCGT GAAAATCAGC
GCCGCCAATC TGCCGACCAT CACGATCGGC GACTCGAATA AGGTGCGCGT GGGCGAATGG
GTCGTGGCGA TCGGCTCGCC GTTCGGTCTC GAGAACACGG TGACGGCCGG CATCGTCAGC
GCCAAGGGGC GCGATACGGG CGACTACCTG CCGTTTATCC AGACCGACGT GGCTGTCAAT
CCGGGCAATT CGGGCGGTCC GCTGATCAAT ATGCAGGGCG AGGTGATCGG CATCAACTCG
CAGATCTACA GTCGCACGGG CGGTTTCATG GGCATCTCGT TCGCGATTCC GATCGACGAG
GCCATGCGTG TGGCCGATCA ATTGAAGGCG TCGGGTAAGG TCGTGCGCGG CCGGATCGCG
GTAGCGATCG GCGAAGTGAC CAAAGACGTG GCCGACTCGC TTGGCCTGCC GAAGGCGCAG
GGAGCGCTGG TTAGCAGCGT CGAACCGGGC GGCCCGGCGG ATAAGGCCGG CGTGCAACCG
GGCGACATCA TCCTTAAGTT CAATGGCCAT TCGGTCGATA CGGCAACGGA TCTGCCGCGC
ATGGTTGGCG ACACCAAGCC GGGCACCAAG TCGACGATTA CGATCTGGCG CAAAGGCCAG
ACGCGCGATC TGCCGGTGAC GATCGCCGAA ATGCAGCCGG ATAAATCGGC CAAGGCGGAT
CAGAAGAAAC CGCAGCCGCC GAAGCAGCGC GCCACCAACG CGCTGGGTGT GGCCGTCAGC
GATATTCCTG CTGACCAACT GAAGGCGCTG AAACTGCGCA ACGGCGTGCA GATCGACGCC
GCGGACGGTC CCGCAGCGCG CGTCGGCTTG CAAAAGGGCG ACATTATCCT GCGGGTAGGC
GATACGGATA TCACCAGCGC GAAGCAGTTC GACGAGGTGA GTTCGCACCT CGATCCGCAG
AAGATGGTCG CGCTGCTGGT TCGCCGCGGC GAGAATACGC AGTTCGTGCC GGTCCGGCCA
CGCAGCGTGC AGAAATGA
 
Protein sequence
MTTFSVRKFL AAAVVAACLP LVPHTASAAS AANLPDFTDL VDKVGPAVVN IRTTTRVSNS 
GTRGGLPPGM DDGDMSEFFR RFFGIPLPQS PQSPGAPGSP RGGDNGGSGG SQDLPDNSDA
EQNSGVGSGF ILSADGYVMT NAHVIDDADT IYVTLTDKRE FKAKLIGVDD RTDVAVVKIS
AANLPTITIG DSNKVRVGEW VVAIGSPFGL ENTVTAGIVS AKGRDTGDYL PFIQTDVAVN
PGNSGGPLIN MQGEVIGINS QIYSRTGGFM GISFAIPIDE AMRVADQLKA SGKVVRGRIA
VAIGEVTKDV ADSLGLPKAQ GALVSSVEPG GPADKAGVQP GDIILKFNGH SVDTATDLPR
MVGDTKPGTK STITIWRKGQ TRDLPVTIAE MQPDKSAKAD QKKPQPPKQR ATNALGVAVS
DIPADQLKAL KLRNGVQIDA ADGPAARVGL QKGDIILRVG DTDITSAKQF DEVSSHLDPQ
KMVALLVRRG ENTQFVPVRP RSVQK