Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2894 |
Symbol | |
ID | 6281420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3275455 |
End bp | 3276483 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622462 |
Product | beta-hexosaminidase |
Protein accession | YP_001896512 |
Protein GI | 187924870 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.684028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0758601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TTCCCGGACC GGTGATGCTC GACGTGGTCG GCAAAACGCT GAACCACGAC GACAAGCGCC GCCTCGCCCA TCCCATGACC GGCGGCGTGA TCCTGTTCGC GCGCCACTAC GAGAGCCGCG CGCAACTGAT CGCGCTGACC GATTCGATCC GCGACATTCG CGACGATCTG CTGATCGCCG TCGATCACGA AGGCGGCCGC GTGCAACGCT TTCGCACCGA CGGCTTCACG GTGCTGCCCG CAATGGGCAA GCTCGGCGCG TTGTGGGACA GCGACGTGCT GCACGCCACC AAAGTGACGA CGGCCGTCGG CTATATCCTC GCGACGGAAC TGCGCGCATG CGGCATCGAC ATGAGCTTTA CGCCGGTGCT CGATCTGAAC TACGGACAAT CGCAGGTAAT CGGCGACCGC TCGTTCCACC GCGATCCGCG CGTGGTGGCG TTGCTCGCCA AGAGCCTGAA CCATGGACTC GCCTTGGCCG GCATGAGCAA TTGCGGCAAG CATTTCCCGG GACACGGCTT CGCCCACGCG GATTCGCATG TCGCCATGCC GGTCGACGAC CGTTCGCTCG AGGAGATTTT GCGCGACGAC GTGGCGCCGT ACGACTGGCT CGGCCTGTCG CTCGGGTCGG TGATTCCGGC GCATGTGATC TATCCGCAGG TCGACTCGAA GCCGGCGGGT TTCTCGCGTG TCTGGCTGCA GGACATTCTT CGCAACAAGC TGCGCTTTGA AGGCGCGATT TTCAGCGACG ATCTGTCGAT GGAAGCTGCG CGCCAGGGCG GCACGCTGAC CGAAGGCGCG AGCGCCGCGC TGCAGGCCGG CTGCGACATG GTGCTGATCT GCAATCAGCC GGACGAAGCG GAGAAGGTGC TGGATGCGCT GCGCTTCACG CCGTCGAAGG AATCGCAACG GCGCTTGCAA CGCATGCGGC CGCGCGGCAA AGCGTTGAAG TGGAGCAAGC TGGTCGCCGA TCCGCAATAT CTGCAAGCGC AGGCGCTGTT GCGTAGCGCG TTTGCATAG
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Protein sequence | MKTIPGPVML DVVGKTLNHD DKRRLAHPMT GGVILFARHY ESRAQLIALT DSIRDIRDDL LIAVDHEGGR VQRFRTDGFT VLPAMGKLGA LWDSDVLHAT KVTTAVGYIL ATELRACGID MSFTPVLDLN YGQSQVIGDR SFHRDPRVVA LLAKSLNHGL ALAGMSNCGK HFPGHGFAHA DSHVAMPVDD RSLEEILRDD VAPYDWLGLS LGSVIPAHVI YPQVDSKPAG FSRVWLQDIL RNKLRFEGAI FSDDLSMEAA RQGGTLTEGA SAALQAGCDM VLICNQPDEA EKVLDALRFT PSKESQRRLQ RMRPRGKALK WSKLVADPQY LQAQALLRSA FA
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