Gene Bphyt_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2894 
Symbol 
ID6281420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3275455 
End bp3276483 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID642622462 
Productbeta-hexosaminidase 
Protein accessionYP_001896512 
Protein GI187924870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.684028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0758601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TTCCCGGACC GGTGATGCTC GACGTGGTCG GCAAAACGCT GAACCACGAC 
GACAAGCGCC GCCTCGCCCA TCCCATGACC GGCGGCGTGA TCCTGTTCGC GCGCCACTAC
GAGAGCCGCG CGCAACTGAT CGCGCTGACC GATTCGATCC GCGACATTCG CGACGATCTG
CTGATCGCCG TCGATCACGA AGGCGGCCGC GTGCAACGCT TTCGCACCGA CGGCTTCACG
GTGCTGCCCG CAATGGGCAA GCTCGGCGCG TTGTGGGACA GCGACGTGCT GCACGCCACC
AAAGTGACGA CGGCCGTCGG CTATATCCTC GCGACGGAAC TGCGCGCATG CGGCATCGAC
ATGAGCTTTA CGCCGGTGCT CGATCTGAAC TACGGACAAT CGCAGGTAAT CGGCGACCGC
TCGTTCCACC GCGATCCGCG CGTGGTGGCG TTGCTCGCCA AGAGCCTGAA CCATGGACTC
GCCTTGGCCG GCATGAGCAA TTGCGGCAAG CATTTCCCGG GACACGGCTT CGCCCACGCG
GATTCGCATG TCGCCATGCC GGTCGACGAC CGTTCGCTCG AGGAGATTTT GCGCGACGAC
GTGGCGCCGT ACGACTGGCT CGGCCTGTCG CTCGGGTCGG TGATTCCGGC GCATGTGATC
TATCCGCAGG TCGACTCGAA GCCGGCGGGT TTCTCGCGTG TCTGGCTGCA GGACATTCTT
CGCAACAAGC TGCGCTTTGA AGGCGCGATT TTCAGCGACG ATCTGTCGAT GGAAGCTGCG
CGCCAGGGCG GCACGCTGAC CGAAGGCGCG AGCGCCGCGC TGCAGGCCGG CTGCGACATG
GTGCTGATCT GCAATCAGCC GGACGAAGCG GAGAAGGTGC TGGATGCGCT GCGCTTCACG
CCGTCGAAGG AATCGCAACG GCGCTTGCAA CGCATGCGGC CGCGCGGCAA AGCGTTGAAG
TGGAGCAAGC TGGTCGCCGA TCCGCAATAT CTGCAAGCGC AGGCGCTGTT GCGTAGCGCG
TTTGCATAG
 
Protein sequence
MKTIPGPVML DVVGKTLNHD DKRRLAHPMT GGVILFARHY ESRAQLIALT DSIRDIRDDL 
LIAVDHEGGR VQRFRTDGFT VLPAMGKLGA LWDSDVLHAT KVTTAVGYIL ATELRACGID
MSFTPVLDLN YGQSQVIGDR SFHRDPRVVA LLAKSLNHGL ALAGMSNCGK HFPGHGFAHA
DSHVAMPVDD RSLEEILRDD VAPYDWLGLS LGSVIPAHVI YPQVDSKPAG FSRVWLQDIL
RNKLRFEGAI FSDDLSMEAA RQGGTLTEGA SAALQAGCDM VLICNQPDEA EKVLDALRFT
PSKESQRRLQ RMRPRGKALK WSKLVADPQY LQAQALLRSA FA