Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2889 |
Symbol | uvrC |
ID | 6283649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3268536 |
End bp | 3270731 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622457 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001896507 |
Protein GI | 187924865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0288597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.314719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCGAAGCAAC CGACGCTTTC GAGCCGAAAA AAGTGCTCGC CCAACTGCCG CATCTGCCCG GCGTCTATCG CTATTACGAT ACGCACGGCG CGGTGCTTTA CGTGGGCAAG GCGCGCGATC TGAAGAAGCG CGTGTCGAGC TACTTCACCA AGACGCTGCT GTCGCCACGT ATCGCGATGA TGGTGACGCG CATTGCGCGC ATCGAAACGA CCGTCACGCG CTCCGAGGCC GAAGCGCTGC TGCTCGAAAA CAATCTGATC AAGGCGCTCG CGCCGCGCTA CAACATTCTG TTTCGCGATG ACAAGTCGTA TCCCTACCTC AAGCTGACCG GTCACAAGTT TCCGCGCATG GCGTATTACC GTGGCGCGGT GGATCGCAAG AATCAGTACT TCGGTCCGTT TCCGAGCGCG TGGGCGGTGC GCGAGAGCAT CCAGATCCTG CAGCGCGTAT TCCAGTTGCG CACCTGCGAA GACTCGGTGT TCAACAACCG CACGCGGCCT TGTCTGCTGC ATCAGATCGG CCGTTGCACG GCGCCGTGCG TCGCGGCGAT CAATGAAGAG GACTACGCGC GCGACGTCGC CAACGCCTCG CGCTTTCTGC TCGGCCGGCA GGGCGAGGTG ATGAAGGAGC TCGAGCAGAA GATGCACGCG TTCGCGAGCG AGCTGAAGTT CGAGCAGGCC GCGGCGGTGC GCAACCAGAT GAGTTCGCTG TCGACGGTGC TGCATCAGCA GGCGATTGAA GTCGGCAGCG ATAGCGACGT GGACATTCTC GCGGTGGTCG CGCTAGGCGG CCGCGTGTGC GTGAATCTGG CGATGGTGCG CGGCGGACGG CATCTGGGCG ACAAGGCGTA TTTTCCGGCG CATGTTGAAA GCGCGCTGAC CGCCGACGAG GGCGGATTGC AAGAAGACGA CGCGGCGTTG GCCAGTGTCG CGCTCGCGTC GAACTCGCTC GCGGGAGACG ATGTCATTGA TGATGAAACG GCAGCGTTGG CCGATACCGC CGACGCTCTC GCGATCGCGC AAGAGATGCC ATCGGAGGAC GAAGAGAACG AGCAGAACGA CGCCGCCGAA GAAGTCGACG TAGCCGAAGA AGCCGGCTCC GAACCCGCAA AGCCGCGCAA AGGCCGTGCT GCAACCGGCG GCATCGAAGC CGAAGTCCTC GAAGCATTCA TCGCCCAGCA TTACCTGGGC AATCGCGTGC CGCCGGTGCT GGTAGTCAGC CACGCACCCG CCAACCGCGA ACTGGTCGAC GTGCTGATCG AACAAGCCGG CCACAAGGTC ACGGTGCTGC GCCAGCCGCA AGGACAACGG CGCGCCTGGC TTACGATGGC CGAACAGAAC GCGCGGCTCG CGCTCGCGCG CCTGCTTTCG GAGCAGGGCT CGCAGCAAGC CCGCACGCGC GCGCTCACGG ACACGCTCGG CATGGAGTGC GACGATCTCG CGCATTTGCG TATCGAATGC TTCGACATCA GCCACACGAT GGGCGAGGCG ACCCAGGCGT CGTGCGTGGT GTATCACCAT CACAAGATGC AGTCGTCGGA GTACCGCCGC TACAACATCA CCGGCATCAC GCCCGGCGAC GACTACGCCG CGATGCGCCA GGTGCTCACG CGCCGTTACG AGAAGATGGT CGAGCAAGCC GCCGCGAATG CCGCCGACGA AGCCGCCGAG TTGCAAAGCG ATGCGGCCGC CGATCCGTCG CTCACGCCGG ACGCCGCGGA GCCGGTCGCG GCCGGCGGCA TCCTGCCCAC CATCGTGCTG ATCGACGGCG GCAAGGGCCA GGTCGAAATC GCGCGTCAGG TGTTCACGGA ACTGGGTCTC GATACCGGCA TGCTGGTCGG TGTCGCGAAG GGCGAAGGGC GCAAAGTCGG CCTCGAAACC CTGATTTTCG CCGACGGCCG CGCGCCGCTC GAACTCGGCA AGGAAAGCGC AGCACTCATG CTGGTCGCAC AGATCCGCGA CGAAGCGCAC CGCTTCGCCA TTACGGGCAT GCGCGCGAAG CGCGGCAAGA CGCGCCAGAC CTCGCGGCTC GAAGAACTCG AAGGCGTGGG CGCGAAGCGG CGTCAACGGC TGCTCGCGCG CTTTGGCGGA CTGCGTGGCG TGGTTGCGGC CAGTGTCGAG GATCTGGCGA GCGTCGAAGG CATTTCGCAG GCACTTGCGG AGCAGATTTA CCGGCAATTG CACTGA
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Protein sequence | MTEPEATDAF EPKKVLAQLP HLPGVYRYYD THGAVLYVGK ARDLKKRVSS YFTKTLLSPR IAMMVTRIAR IETTVTRSEA EALLLENNLI KALAPRYNIL FRDDKSYPYL KLTGHKFPRM AYYRGAVDRK NQYFGPFPSA WAVRESIQIL QRVFQLRTCE DSVFNNRTRP CLLHQIGRCT APCVAAINEE DYARDVANAS RFLLGRQGEV MKELEQKMHA FASELKFEQA AAVRNQMSSL STVLHQQAIE VGSDSDVDIL AVVALGGRVC VNLAMVRGGR HLGDKAYFPA HVESALTADE GGLQEDDAAL ASVALASNSL AGDDVIDDET AALADTADAL AIAQEMPSED EENEQNDAAE EVDVAEEAGS EPAKPRKGRA ATGGIEAEVL EAFIAQHYLG NRVPPVLVVS HAPANRELVD VLIEQAGHKV TVLRQPQGQR RAWLTMAEQN ARLALARLLS EQGSQQARTR ALTDTLGMEC DDLAHLRIEC FDISHTMGEA TQASCVVYHH HKMQSSEYRR YNITGITPGD DYAAMRQVLT RRYEKMVEQA AANAADEAAE LQSDAAADPS LTPDAAEPVA AGGILPTIVL IDGGKGQVEI ARQVFTELGL DTGMLVGVAK GEGRKVGLET LIFADGRAPL ELGKESAALM LVAQIRDEAH RFAITGMRAK RGKTRQTSRL EELEGVGAKR RQRLLARFGG LRGVVAASVE DLASVEGISQ ALAEQIYRQL H
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