Gene Bphyt_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2889 
SymboluvrC 
ID6283649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3268536 
End bp3270731 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content64% 
IMG OID642622457 
Productexcinuclease ABC subunit C 
Protein accessionYP_001896507 
Protein GI187924865 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0288597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.314719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CCGAAGCAAC CGACGCTTTC GAGCCGAAAA AAGTGCTCGC CCAACTGCCG 
CATCTGCCCG GCGTCTATCG CTATTACGAT ACGCACGGCG CGGTGCTTTA CGTGGGCAAG
GCGCGCGATC TGAAGAAGCG CGTGTCGAGC TACTTCACCA AGACGCTGCT GTCGCCACGT
ATCGCGATGA TGGTGACGCG CATTGCGCGC ATCGAAACGA CCGTCACGCG CTCCGAGGCC
GAAGCGCTGC TGCTCGAAAA CAATCTGATC AAGGCGCTCG CGCCGCGCTA CAACATTCTG
TTTCGCGATG ACAAGTCGTA TCCCTACCTC AAGCTGACCG GTCACAAGTT TCCGCGCATG
GCGTATTACC GTGGCGCGGT GGATCGCAAG AATCAGTACT TCGGTCCGTT TCCGAGCGCG
TGGGCGGTGC GCGAGAGCAT CCAGATCCTG CAGCGCGTAT TCCAGTTGCG CACCTGCGAA
GACTCGGTGT TCAACAACCG CACGCGGCCT TGTCTGCTGC ATCAGATCGG CCGTTGCACG
GCGCCGTGCG TCGCGGCGAT CAATGAAGAG GACTACGCGC GCGACGTCGC CAACGCCTCG
CGCTTTCTGC TCGGCCGGCA GGGCGAGGTG ATGAAGGAGC TCGAGCAGAA GATGCACGCG
TTCGCGAGCG AGCTGAAGTT CGAGCAGGCC GCGGCGGTGC GCAACCAGAT GAGTTCGCTG
TCGACGGTGC TGCATCAGCA GGCGATTGAA GTCGGCAGCG ATAGCGACGT GGACATTCTC
GCGGTGGTCG CGCTAGGCGG CCGCGTGTGC GTGAATCTGG CGATGGTGCG CGGCGGACGG
CATCTGGGCG ACAAGGCGTA TTTTCCGGCG CATGTTGAAA GCGCGCTGAC CGCCGACGAG
GGCGGATTGC AAGAAGACGA CGCGGCGTTG GCCAGTGTCG CGCTCGCGTC GAACTCGCTC
GCGGGAGACG ATGTCATTGA TGATGAAACG GCAGCGTTGG CCGATACCGC CGACGCTCTC
GCGATCGCGC AAGAGATGCC ATCGGAGGAC GAAGAGAACG AGCAGAACGA CGCCGCCGAA
GAAGTCGACG TAGCCGAAGA AGCCGGCTCC GAACCCGCAA AGCCGCGCAA AGGCCGTGCT
GCAACCGGCG GCATCGAAGC CGAAGTCCTC GAAGCATTCA TCGCCCAGCA TTACCTGGGC
AATCGCGTGC CGCCGGTGCT GGTAGTCAGC CACGCACCCG CCAACCGCGA ACTGGTCGAC
GTGCTGATCG AACAAGCCGG CCACAAGGTC ACGGTGCTGC GCCAGCCGCA AGGACAACGG
CGCGCCTGGC TTACGATGGC CGAACAGAAC GCGCGGCTCG CGCTCGCGCG CCTGCTTTCG
GAGCAGGGCT CGCAGCAAGC CCGCACGCGC GCGCTCACGG ACACGCTCGG CATGGAGTGC
GACGATCTCG CGCATTTGCG TATCGAATGC TTCGACATCA GCCACACGAT GGGCGAGGCG
ACCCAGGCGT CGTGCGTGGT GTATCACCAT CACAAGATGC AGTCGTCGGA GTACCGCCGC
TACAACATCA CCGGCATCAC GCCCGGCGAC GACTACGCCG CGATGCGCCA GGTGCTCACG
CGCCGTTACG AGAAGATGGT CGAGCAAGCC GCCGCGAATG CCGCCGACGA AGCCGCCGAG
TTGCAAAGCG ATGCGGCCGC CGATCCGTCG CTCACGCCGG ACGCCGCGGA GCCGGTCGCG
GCCGGCGGCA TCCTGCCCAC CATCGTGCTG ATCGACGGCG GCAAGGGCCA GGTCGAAATC
GCGCGTCAGG TGTTCACGGA ACTGGGTCTC GATACCGGCA TGCTGGTCGG TGTCGCGAAG
GGCGAAGGGC GCAAAGTCGG CCTCGAAACC CTGATTTTCG CCGACGGCCG CGCGCCGCTC
GAACTCGGCA AGGAAAGCGC AGCACTCATG CTGGTCGCAC AGATCCGCGA CGAAGCGCAC
CGCTTCGCCA TTACGGGCAT GCGCGCGAAG CGCGGCAAGA CGCGCCAGAC CTCGCGGCTC
GAAGAACTCG AAGGCGTGGG CGCGAAGCGG CGTCAACGGC TGCTCGCGCG CTTTGGCGGA
CTGCGTGGCG TGGTTGCGGC CAGTGTCGAG GATCTGGCGA GCGTCGAAGG CATTTCGCAG
GCACTTGCGG AGCAGATTTA CCGGCAATTG CACTGA
 
Protein sequence
MTEPEATDAF EPKKVLAQLP HLPGVYRYYD THGAVLYVGK ARDLKKRVSS YFTKTLLSPR 
IAMMVTRIAR IETTVTRSEA EALLLENNLI KALAPRYNIL FRDDKSYPYL KLTGHKFPRM
AYYRGAVDRK NQYFGPFPSA WAVRESIQIL QRVFQLRTCE DSVFNNRTRP CLLHQIGRCT
APCVAAINEE DYARDVANAS RFLLGRQGEV MKELEQKMHA FASELKFEQA AAVRNQMSSL
STVLHQQAIE VGSDSDVDIL AVVALGGRVC VNLAMVRGGR HLGDKAYFPA HVESALTADE
GGLQEDDAAL ASVALASNSL AGDDVIDDET AALADTADAL AIAQEMPSED EENEQNDAAE
EVDVAEEAGS EPAKPRKGRA ATGGIEAEVL EAFIAQHYLG NRVPPVLVVS HAPANRELVD
VLIEQAGHKV TVLRQPQGQR RAWLTMAEQN ARLALARLLS EQGSQQARTR ALTDTLGMEC
DDLAHLRIEC FDISHTMGEA TQASCVVYHH HKMQSSEYRR YNITGITPGD DYAAMRQVLT
RRYEKMVEQA AANAADEAAE LQSDAAADPS LTPDAAEPVA AGGILPTIVL IDGGKGQVEI
ARQVFTELGL DTGMLVGVAK GEGRKVGLET LIFADGRAPL ELGKESAALM LVAQIRDEAH
RFAITGMRAK RGKTRQTSRL EELEGVGAKR RQRLLARFGG LRGVVAASVE DLASVEGISQ
ALAEQIYRQL H