Gene Bphyt_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2887 
Symbol 
ID6283093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3265702 
End bp3266460 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID642622452 
ProductGumN family protein 
Protein accessionYP_001896505 
Protein GI187924863 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.301907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTAC AACTCACCGG CACCCAAGTT CGCCTGCTCG GCTCGATGCA TCTATTTCCG 
GCGACGAGCC GCAGAACGCC GCCGTGGATC GCCGAGGCCT ACGACTGGGC CGAAGCGCTC
GTCTTCGAGT CCGATCCGCC GACGATCCTG CCGTTTCTCA AGGCCGACCA ACCAGGCAGC
GCGCAGCAAC TGCAGCCCTT TCTTTCCGCC GACGCATGGC GGCAACTCCA GGCGGCGTGG
CCCGTTGATG GACCTTTGGC GCCACTCGCC GATCTGCGTC CGTGGGCCGC GCTGATCGTC
GCGCCGACCT TGTTCCAGCA GGTCGTCGAA GGTGTCGAGC CGCGCATGCT GCGCTCGGCG
ATCACGCAGG CCAAGCCCTA TCGGTATCTC GAGACCGCGG ACGAGGTAGC GGCGGCGCTT
GAATCGATTC CGCTAGATGC GGTCGGCGCA GCGCTTGGCC TGCTGATGGC CGATCTCGAC
GAACCGCAGC GCACGCTCGA GCGCATGCAC GCAGCCTGGC TGGATGGCGA TCTGCCCGCC
GTGCACCAAA TCGCCATCGA GTCGCCAATG TTCAATCTGC CGGGCATCCG GCATGCGATT
CTAGACGCGC GCAATTGCGC ATGGGCGACG CGCCTGACGG AGTTGCTCAC GCGGCCGGAG
CGCACGTTGG TCGTGGTCGG CGCGCTGCAT CTGTGTGGCC CCGGTAATCT GATCGACTGC
CTCGCGCGGC CCGTCGAACC GGTCTTTGCC AACCCATAG
 
Protein sequence
MYLQLTGTQV RLLGSMHLFP ATSRRTPPWI AEAYDWAEAL VFESDPPTIL PFLKADQPGS 
AQQLQPFLSA DAWRQLQAAW PVDGPLAPLA DLRPWAALIV APTLFQQVVE GVEPRMLRSA
ITQAKPYRYL ETADEVAAAL ESIPLDAVGA ALGLLMADLD EPQRTLERMH AAWLDGDLPA
VHQIAIESPM FNLPGIRHAI LDARNCAWAT RLTELLTRPE RTLVVVGALH LCGPGNLIDC
LARPVEPVFA NP