| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2886 |
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| Symbol | |
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| ID | 6283092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3264530 |
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| End bp | 3265510 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622451 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001896504 |
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| Protein GI | 187924862 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.322967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTCC CACCGACGCC CACGAACGAA AGCGCCCGTC TCGACACTTT GCGTGCGCTG
CATATTCTCG ATACGTTGCC CGAAGAGCGC TTCGATCGTC TGACCCGGCT CGCCAAGCGG
CTCTTCGGCG TGCCCATCGC GCTCGTGAGT CTCGTCGACG CGGACCGTCA ATGGTTCAAG
TCGTGTGTCG GCCTGGAGGC GAGCGAGACC TCGCGCGACG TATCGTTCTG CGCGCACGCG
ATTCTCGGCG ACGAAATCCT GATGGTGCCC GACACGCTCG CGGACGAGCG CTTTCACGAC
AATCCGCTCG TTACGGACAA CCCGAGTATC CGCTTCTACG CCGGTTGTCC GCTGACGGTG
CCCAACGGCA GCAAGCTCGG CACGCTCTGT CTGATCGACA CCAAGCCGCG CGGCCTCGAC
GAAGAAGAAC GTCAACTCCT GCGCGATCTG GCGCGCATGG CCGAGCAGGA ATTGGCGGCG
GTCCAGTTGG CCACGCTTGA CGATCTGACG CTGCTGTCGA ACCGGCGCGG TTTCGAGGCG
CTCGCGCAAC ATGCGCTGAA CGTTTGCAAG CGGATGCACA AACCGGCGTC GCTGCTGTTC
TTCGACCTGA ACGATTTCAA GCAGATCAAC GACACGCTCG GCCACGCCGA AGGCGATCGC
GCGCTGAAGA CCTTCGCCGA CGTCTTGCGT ACCGCGCTGC GTGAAAGCGA CGTGATCGGG
CGGCTCGGCG GCGACGAGTT TGTCGTGCTG CTCACCGATT CGGACAGCGG TGCCACGCAG
GAAGTGACGC AGCGTCTCAC GCAGATGCTG GACGCGCGCA ATGCCGAAGC GCAGCGTGGC
TATCACATCC GCTATAGCGT CGGGCAGGTT CAATACGATT GCGCCCGGCA CCAATCCATT
GCCGAACTGC TGGCGGCCGC CGACGCTGCG ATGTACAGCC ACAAACAGGC GTCGAAGGCG
CGCGCTGCGC ATCGCAACTG A
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| Protein sequence | MHVPPTPTNE SARLDTLRAL HILDTLPEER FDRLTRLAKR LFGVPIALVS LVDADRQWFK
SCVGLEASET SRDVSFCAHA ILGDEILMVP DTLADERFHD NPLVTDNPSI RFYAGCPLTV
PNGSKLGTLC LIDTKPRGLD EEERQLLRDL ARMAEQELAA VQLATLDDLT LLSNRRGFEA
LAQHALNVCK RMHKPASLLF FDLNDFKQIN DTLGHAEGDR ALKTFADVLR TALRESDVIG
RLGGDEFVVL LTDSDSGATQ EVTQRLTQML DARNAEAQRG YHIRYSVGQV QYDCARHQSI
AELLAAADAA MYSHKQASKA RAAHRN
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