Gene Bphyt_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2873 
Symbol 
ID6281902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3249792 
End bp3250238 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID642622437 
ProductRibonuclease H 
Protein accessionYP_001896491 
Protein GI187924849 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00808472 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.318566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG ATCTCATCGA TATTTATACC GACGGCGCCT GCAAGGGCAA CCCCGGCCCC 
GGCGGCTGGG GCGCGCTGCT GCGCTTCGGC GACCAGGAAA AAGAACTGTT CGGCGGCGAA
GCCAACACCA CCAACAACCG CATGGAACTG ATGGGCGTGA TCGCCGCGCT GGAAGCGCTG
AAGCGCCCTT GCAAAGCGGT CGTGCACACC GACTCACAGT ACGTGCAGAA AGGCATCAGC
GAATGGATCC ACGGCTGGAA GAAGAAAGGC TGGATCACCG CCGCCAAGCA GCCGGTCAAG
AACGCCGACT TGTGGAAGCG GCTCGACGCA CTCGTCGCGC AACACGAAAT CGAATGGCGC
TGGGTGCGCG GGCACAACGG CCACCCGGAA AACGAGCGCG CCGATCAGCT GGCCAATCGC
GGCGTCGCAT CACTCGCGCA GCTGTAA
 
Protein sequence
MTSDLIDIYT DGACKGNPGP GGWGALLRFG DQEKELFGGE ANTTNNRMEL MGVIAALEAL 
KRPCKAVVHT DSQYVQKGIS EWIHGWKKKG WITAAKQPVK NADLWKRLDA LVAQHEIEWR
WVRGHNGHPE NERADQLANR GVASLAQL