Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2871 |
Symbol | |
ID | 6283876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3248121 |
End bp | 3248912 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642622435 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_001896489 |
Protein GI | 187924847 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00247676 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.571794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGC TCGAGTACGT ACCGGTCCCG GCGTTTGATG ACAATTACAT CTGGGTCGTT TCCGACGGAC GCCACGCGGC GGTCGTCGAT CCGGGTGAGG CCGCCCCCGT TAAAGCCTAT CTGGCGAAAC GGGGTTGGCG GCTGAGCGCT ATTTTACTCA CGCACCATCA TCAAGACCAC GTCGGCGGGG TGGCCGATCT GCTGAATGGC CAGGCCGTGC CCGTCTACGG CCCCGCCGGT GAAGCGATCG AGCATCTCAC ACACCGTCTG AAAAATGGCG ATCACGTGTC GATTGCGGCG CCGGCGCTCA AATTGAGCGT GCTCGACGTG CCGGGTCACA CGAGCGGCCA CATCGCCTAT TTTCAGGCGG CCGACCCGCA AGGCACGCCG CACGTGTTTT GTGGCGACAC GCTGTTCGCC TGCGGTTGCG GCCGGCTGTT CGAAGGCACG CCAAAGCAGA TGCTCGCCTC GCTGGATTCG CTGGCCGCGC TGCCCGGCGC GACCGAGGTC CACTGCGCGC ACGAGTACAC GCTGTCGAAT ATCCGCTTCG CGCTCGCCTG CGAGCCGGGC AACGCCGAGC TGCAAGCCTG GCGGGACAAA GCGAGCGAAC TGCGCGCGCG CGACGTGCCC ACGTTGCCCA CCACGATCGC CCATGAGCGC GCAGTGAATC CGTTTTTACG CGCCGGCGAC CCAGCGGTGC AGGCGAGCTT GCGGGAGCAG TTGCACGAGG CAGTGCCGGA TCGATTGACG GCCTTTACCT TGATGCGCGA ATGGAAGAAC CGCTTCCGTT AA
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Protein sequence | MNALEYVPVP AFDDNYIWVV SDGRHAAVVD PGEAAPVKAY LAKRGWRLSA ILLTHHHQDH VGGVADLLNG QAVPVYGPAG EAIEHLTHRL KNGDHVSIAA PALKLSVLDV PGHTSGHIAY FQAADPQGTP HVFCGDTLFA CGCGRLFEGT PKQMLASLDS LAALPGATEV HCAHEYTLSN IRFALACEPG NAELQAWRDK ASELRARDVP TLPTTIAHER AVNPFLRAGD PAVQASLREQ LHEAVPDRLT AFTLMREWKN RFR
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