Gene Bphyt_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2842 
Symbol 
ID6283932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3213924 
End bp3214652 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID642622405 
Productpentapeptide repeat protein 
Protein accessionYP_001896460 
Protein GI187924818 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.713395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.309994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG ATTCAACGGC GCCGGCTTCA GGCGCGCAAG CTCATGTCGT GACCGACGCC 
GCGCTCACGC GCGCGGAAGT GGAGCGACTT GTCGCGGCCA GCCTCGCCGG CAATAAGGCG
CCGCTTCATT TCACCGACTG CGATTTCGAA GGCGTCGACC TCTCGCGACT CGATCTGCGC
GGCGCCGAGT TTCAGCGCTG CACGATCGTC GAGACGTCGT TTTTCGGCGC GGCGCTCTCG
CATACCCGCT GGGTCCGTTG CCGTGGCCGC GAGGCGGACT TCGCGTCGGC CGATCTGGTC
GACGCGGCGT TTCAGTCGAG CGACCTGAAC AACACCAGTT GGCGGCGCGC CAAGCTGGCT
TCGGCGTCGT TTCATAGCTG CAAGCTGACC GGCGCCAATT TCGAAGCATG CACGGCGCTG
GGTTTGAGCT TCGTCGAAAC CCTGCTGGTT GGCGCGCACC TGCGCGGCCT GTCGTTTCGC
AAGGCCACGC TGCAACAACT GGATTTTTCG GATGCCGACC TGGCCGGCGT GGACTTCCGT
GAAGCGATCT TCGACGGCGG CAGCCTGAAG GATGCGCACC TGAAGGGCGC GCGCTTCGAC
GGCGCGGACC TGCGCGAAGC CGACCTCAGC GGCGTGCGGC TGGTGGATGC GGCGCTCTTC
AAGGGCGCGA CGATCTCGCA TGCCCAAGCG GCCGTGCTCG TCACCGAGCT GGGGTTGCGG
GTCATGTGA
 
Protein sequence
MSLDSTAPAS GAQAHVVTDA ALTRAEVERL VAASLAGNKA PLHFTDCDFE GVDLSRLDLR 
GAEFQRCTIV ETSFFGAALS HTRWVRCRGR EADFASADLV DAAFQSSDLN NTSWRRAKLA
SASFHSCKLT GANFEACTAL GLSFVETLLV GAHLRGLSFR KATLQQLDFS DADLAGVDFR
EAIFDGGSLK DAHLKGARFD GADLREADLS GVRLVDAALF KGATISHAQA AVLVTELGLR
VM