Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2842 |
Symbol | |
ID | 6283932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3213924 |
End bp | 3214652 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622405 |
Product | pentapeptide repeat protein |
Protein accession | YP_001896460 |
Protein GI | 187924818 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.713395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.309994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGG ATTCAACGGC GCCGGCTTCA GGCGCGCAAG CTCATGTCGT GACCGACGCC GCGCTCACGC GCGCGGAAGT GGAGCGACTT GTCGCGGCCA GCCTCGCCGG CAATAAGGCG CCGCTTCATT TCACCGACTG CGATTTCGAA GGCGTCGACC TCTCGCGACT CGATCTGCGC GGCGCCGAGT TTCAGCGCTG CACGATCGTC GAGACGTCGT TTTTCGGCGC GGCGCTCTCG CATACCCGCT GGGTCCGTTG CCGTGGCCGC GAGGCGGACT TCGCGTCGGC CGATCTGGTC GACGCGGCGT TTCAGTCGAG CGACCTGAAC AACACCAGTT GGCGGCGCGC CAAGCTGGCT TCGGCGTCGT TTCATAGCTG CAAGCTGACC GGCGCCAATT TCGAAGCATG CACGGCGCTG GGTTTGAGCT TCGTCGAAAC CCTGCTGGTT GGCGCGCACC TGCGCGGCCT GTCGTTTCGC AAGGCCACGC TGCAACAACT GGATTTTTCG GATGCCGACC TGGCCGGCGT GGACTTCCGT GAAGCGATCT TCGACGGCGG CAGCCTGAAG GATGCGCACC TGAAGGGCGC GCGCTTCGAC GGCGCGGACC TGCGCGAAGC CGACCTCAGC GGCGTGCGGC TGGTGGATGC GGCGCTCTTC AAGGGCGCGA CGATCTCGCA TGCCCAAGCG GCCGTGCTCG TCACCGAGCT GGGGTTGCGG GTCATGTGA
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Protein sequence | MSLDSTAPAS GAQAHVVTDA ALTRAEVERL VAASLAGNKA PLHFTDCDFE GVDLSRLDLR GAEFQRCTIV ETSFFGAALS HTRWVRCRGR EADFASADLV DAAFQSSDLN NTSWRRAKLA SASFHSCKLT GANFEACTAL GLSFVETLLV GAHLRGLSFR KATLQQLDFS DADLAGVDFR EAIFDGGSLK DAHLKGARFD GADLREADLS GVRLVDAALF KGATISHAQA AVLVTELGLR VM
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