| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2833 |
|---|
| Symbol | |
|---|
| ID | 6282932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3204312 |
|---|
| End bp | 3205694 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642622395 |
|---|
| Product | Di-haem cytochrome c peroxidase |
|---|
| Protein accession | YP_001896451 |
|---|
| Protein GI | 187924809 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.85653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00293873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGGG TCGGCGCAAA TCATGACGCC GGGCTCGGGA CGAAGCGCCT GCGGCAAGCG
ACGGCGTTCG CGTTGACGGC CATGACCTTG ACGCTTGCCG CGTGCGATGC GGGCGCGCCG
GGCACGGGCG CCGTCGCGAG CACGGGCGCG GGCGTATCGC CTTCGTCCGT GCCATTGGCG
GCGCCGGTTG TGCAAGTTGC CGCTCATGAA GCAGGCCAGT CTCGCGCGCA GGTCTACGAA
TCCGTGCGGC AGATGACGGC GCTCGGCAAA CAACTATTTT TCGACGCATC GCTCTCAGGT
TCGGGCAAGC TTGCTTGCGC GTCGTGTCAC AGTCCGGAGC ATGGGTTCTC GCCGGCCAAT
GCGTTGTCGG TGCAACTGGG CGGCAACGAC ATGCACCGCA CCGGCATGCG CGCCGCGCCG
ACGCTGAAGT ATCTGCAATC GGTGCCGGCG TTCGCCGAGC ACTATCACGA GTCGGACGAC
GAAGGCGACG AAAGCGTGGA TGCCGGACCC ACCGGCGGCC TGACCTGGGA TGGCCGCGTC
GACCGGGGCG GCGACCAGGC GCGCATTCCG CTGCTGTCGT CGTTCGAAAT GGGCAGCACG
CCGGCCAAGG TCACTGCGGC GGTCAAGGCC GCGCCGTACG CCGACGCTTT CCGCGCGGCC
TTCGGCGCAC ACATTTTCGA CAGCGACGAC GCCACCTTCA AAGCGGTGCT GCAAGCGCTC
GAAACCTTCG AGCAGACGCC GGAAACTTTC TATCCGTACA CCAGCAAATA CGACGCCTAT
CTGGCGGGCA AGGCGCAGTT GACGCAAGCT GAACTGCGCG GCCTGCAACT CTTCAACGAT
GAGAAAAAAG GCAATTGCGC GAGCTGTCAC ATCAGCCAGC GCAGCATGGA CGGCGCGCCA
CCGCAGTTCA GCGATTTCGG TCTGATCGCG ATCGGCGTGC CGCGCAATCG CTCGCTGTCC
GTGAATCGCG ATCCGCATTT CTACGATCTC GGCGCCTGTG GCCCGGAGCG CACCGATCTG
AAGGGACGCG CCGAATTTTG CGGGATCTTC CGCACGCCGA CGCTACGCAA TGTGGCGCTA
AAGAAAAGCT TCTTCCACAA CGGCGTCTAC CATTCGCTCG ATCAGGTGGT GCGCTTCTAT
GCCGAGCGCG ACACGAACCC GGAGAAGTTC TATCCGGTGG CGAAAGGCAA AGTGCGGAAG
TTCGACGATC TGCCTCAGCA GTACTGGGCC AATCTGAATA CCGATCCGCC GTTCGACCGC
AAGCCGGGCG ACAAGCCGGC GCTCGACGAG GCTGAAATCA AGGACGTGGT CGCGTTTTTG
AATACGCTGA CGGACGGATA CAAGGCGGGA AGCGGGGCGG CCGATTCGGT GGCCGCAAAG
TGA
|
|---|
| Protein sequence | MARVGANHDA GLGTKRLRQA TAFALTAMTL TLAACDAGAP GTGAVASTGA GVSPSSVPLA
APVVQVAAHE AGQSRAQVYE SVRQMTALGK QLFFDASLSG SGKLACASCH SPEHGFSPAN
ALSVQLGGND MHRTGMRAAP TLKYLQSVPA FAEHYHESDD EGDESVDAGP TGGLTWDGRV
DRGGDQARIP LLSSFEMGST PAKVTAAVKA APYADAFRAA FGAHIFDSDD ATFKAVLQAL
ETFEQTPETF YPYTSKYDAY LAGKAQLTQA ELRGLQLFND EKKGNCASCH ISQRSMDGAP
PQFSDFGLIA IGVPRNRSLS VNRDPHFYDL GACGPERTDL KGRAEFCGIF RTPTLRNVAL
KKSFFHNGVY HSLDQVVRFY AERDTNPEKF YPVAKGKVRK FDDLPQQYWA NLNTDPPFDR
KPGDKPALDE AEIKDVVAFL NTLTDGYKAG SGAADSVAAK
|
|---|
| |