Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2815 |
Symbol | |
ID | 6281660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3184425 |
End bp | 3185177 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642622377 |
Product | ABC transporter related |
Protein accession | YP_001896433 |
Protein GI | 187924791 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.454528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.076686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCCG CGCTCGCGCT CTACGGCATC GAAAAACGCT TCGGCTCGAC GCGGATTCTG CGCGGCGTCG ATCTCGCGAT CCAACCGGGC GAGCGTCACG CGCTGATCGG TCCGAACGGC GCGGGCAAGT CGACGCTCTT CAATCTGATC GCCGGCGGCG CGCGGCCGAA CGCGGGGCGC ATCGATCTGT TCGGCGCCGA GATCACGCGG CTCGCGCCGG CCGCGATCAC GCGTCGCGGA CTTGCGCGCA GCTTCCAGAG CACCAGCGTG TTCACGCGCC TCAGCGTGTT CGACAACCTG CGCTGCGCGG CGATGCTGGC TGAGCGTGAC CGCACGCGCT GGTGGCAGCG TTTCAGCGGC TCGCCAACGG TCGACGCGCG CGCCGCACAA GTGCTCGACG CGGTGGGCCT GACCGAGCGC CGCCACGTTC AGGCCGGCAC GCTCAGCTAT GCCGAGCAGC GCGCGCTCGA TCTCGGCATC GCGCTCGCGG GCGGCGCGCA TACCTTGCTG CTCGACGAGC CGACGGCCGG CATGAATCGC GCGGAAGCGG CGCGCACCAT CGAACTGATT CGCGAGACCA CGGCGGGCCG CACGCTGTTG ATGGTCGAGC ACGACATGGA CGCGGTCTTC GCGATCGCCG ATCGCATTTC GGTGCTCGTG CAAGGACGCA TCATCGCGAG CGGCACGCCG GCGGCGATCC GCGCGGACGA GACAGTGCGC GCCGCCTATC TCGGCGAAGG ATTCGGCACA TGA
|
Protein sequence | MIPALALYGI EKRFGSTRIL RGVDLAIQPG ERHALIGPNG AGKSTLFNLI AGGARPNAGR IDLFGAEITR LAPAAITRRG LARSFQSTSV FTRLSVFDNL RCAAMLAERD RTRWWQRFSG SPTVDARAAQ VLDAVGLTER RHVQAGTLSY AEQRALDLGI ALAGGAHTLL LDEPTAGMNR AEAARTIELI RETTAGRTLL MVEHDMDAVF AIADRISVLV QGRIIASGTP AAIRADETVR AAYLGEGFGT
|
| |