Gene Bphyt_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2815 
Symbol 
ID6281660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3184425 
End bp3185177 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID642622377 
ProductABC transporter related 
Protein accessionYP_001896433 
Protein GI187924791 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.454528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.076686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG CGCTCGCGCT CTACGGCATC GAAAAACGCT TCGGCTCGAC GCGGATTCTG 
CGCGGCGTCG ATCTCGCGAT CCAACCGGGC GAGCGTCACG CGCTGATCGG TCCGAACGGC
GCGGGCAAGT CGACGCTCTT CAATCTGATC GCCGGCGGCG CGCGGCCGAA CGCGGGGCGC
ATCGATCTGT TCGGCGCCGA GATCACGCGG CTCGCGCCGG CCGCGATCAC GCGTCGCGGA
CTTGCGCGCA GCTTCCAGAG CACCAGCGTG TTCACGCGCC TCAGCGTGTT CGACAACCTG
CGCTGCGCGG CGATGCTGGC TGAGCGTGAC CGCACGCGCT GGTGGCAGCG TTTCAGCGGC
TCGCCAACGG TCGACGCGCG CGCCGCACAA GTGCTCGACG CGGTGGGCCT GACCGAGCGC
CGCCACGTTC AGGCCGGCAC GCTCAGCTAT GCCGAGCAGC GCGCGCTCGA TCTCGGCATC
GCGCTCGCGG GCGGCGCGCA TACCTTGCTG CTCGACGAGC CGACGGCCGG CATGAATCGC
GCGGAAGCGG CGCGCACCAT CGAACTGATT CGCGAGACCA CGGCGGGCCG CACGCTGTTG
ATGGTCGAGC ACGACATGGA CGCGGTCTTC GCGATCGCCG ATCGCATTTC GGTGCTCGTG
CAAGGACGCA TCATCGCGAG CGGCACGCCG GCGGCGATCC GCGCGGACGA GACAGTGCGC
GCCGCCTATC TCGGCGAAGG ATTCGGCACA TGA
 
Protein sequence
MIPALALYGI EKRFGSTRIL RGVDLAIQPG ERHALIGPNG AGKSTLFNLI AGGARPNAGR 
IDLFGAEITR LAPAAITRRG LARSFQSTSV FTRLSVFDNL RCAAMLAERD RTRWWQRFSG
SPTVDARAAQ VLDAVGLTER RHVQAGTLSY AEQRALDLGI ALAGGAHTLL LDEPTAGMNR
AEAARTIELI RETTAGRTLL MVEHDMDAVF AIADRISVLV QGRIIASGTP AAIRADETVR
AAYLGEGFGT