Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2811 |
Symbol | |
ID | 6281656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3179210 |
End bp | 3180127 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622373 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_001896429 |
Protein GI | 187924787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.279544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.182339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTT TCGACGTACG TATCGGCATC AATCCGCTCT CGTGGATGAA TGACGATCTG CCTTCGCTCG GCGGCGAGAC GCCGCTCGAA GTGGCGCTGA CGGAAGGCCG CGAGATCGGC TATCAAGGCT TCGAACTCGG CAACAAGTTT CCACGTGAAC CGCAGGCGTT GAAGTCGCTG CTCGCGCAAT ACGATCTCGC GCTCGTCTCC GGCTGGTATT CCGGACGCCT CGCGCGACGC AGCGTCGAAG AAGAAATCGC GGAGGTCGGC CCGCATCTCG AACTACTCGC GCAAAACGGC GCGACGGCGA TGGTGTACGG TGAGGTTGCC GATTCGATTC AGGGCGCAGC GCAACCCCTT TACCAGCGCC CGCGCTTTTT CAGCGAGAAG CAATGGGCCG ACTATGCGGC CCGTGTCGAC GAATTCGCAC GTTATACGCT GAGCCGCGGC GTGCGGCTCG CCTATCATCA CCACATGGGC GCCTATGTCG AAACGCCTGC CGATGTAGAC CAACTGATGG CGCGCACCAG CGACGCCGTT GGCCTGCTGT TCGACGCGGG ACACATCACG TTTGCCGGTG GCGATCCGCT CGCCGTGCTC GACAAACATA TCGGGCGCGT TTGCCACGTG CATTGCAAGG ACGTGCGCCC CGCCGTCATG AAGCTCGCGC GCAATCGCAA CTGGAGTTTT TTGGACGCGG TCATCGCCGG CGCCTTCACG GTGCCGGGCG ACGGCGCGGT GAATTTCCCC GCGATCATCG AGCGCCTGAA GCGGCACGGT TATTGCGGCT GGCTGGTGGT GGAAGCCGAA CAGGATCCGG TCGTGGCGCC GTCGTTCGAG TACGCGCAGA AAGGCTACAA GACGTTGCGC GCGCTGGTCG ATGCGCCGCT CGACGGCACA GAGCAGGAGG CAGCATGA
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Protein sequence | MTAFDVRIGI NPLSWMNDDL PSLGGETPLE VALTEGREIG YQGFELGNKF PREPQALKSL LAQYDLALVS GWYSGRLARR SVEEEIAEVG PHLELLAQNG ATAMVYGEVA DSIQGAAQPL YQRPRFFSEK QWADYAARVD EFARYTLSRG VRLAYHHHMG AYVETPADVD QLMARTSDAV GLLFDAGHIT FAGGDPLAVL DKHIGRVCHV HCKDVRPAVM KLARNRNWSF LDAVIAGAFT VPGDGAVNFP AIIERLKRHG YCGWLVVEAE QDPVVAPSFE YAQKGYKTLR ALVDAPLDGT EQEAA
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