Gene Bphyt_2795 details

Gene Information

• Locus tag: Bphyt_2795
• Symbol: prpE
• ID: 6280892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: +
• Start bp: 3154828
• End bp: 3156732
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642622357
• Product: propionyl-CoA synthetase
• Protein accession: YP_001896413
• Protein GI: 187924771
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.53121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.243025
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAGCT ATCGCGACTT CCACCGCCGT TCGATCGAAG ACCCCGAAGC ATTCTGGCGC 
GACGAGGCGC GGCGCATTCA TTGGCACACG CCGTTCGATA CGGTGCTCGA CCGTTCGAAT 
CCGCCGTTCG CGCGCTGGTT TGTCGGCGGC CGGACGAACC TGTGCCACAA CGCGGTGGAC 
CGCCATCTGG CCGAGCGCGC GCAGCAGAAC GCGCTAGTGT ATGTGTCGAC GGAAACCGGC 
ATCGAGCGGC GCTACACCTA CGCCGAACTG TACGGCGAGG TCAACCGGAT GGCAGCGGTC 
ATGCGCTCGC TCGACGTGAA ACGCGGCGAC GTAGTGCTGC TCTATCTGCC GATGATCCCC 
GAAGCCCTGT TCGCGATGCT CGCCTGCGCG CGTCTCGGCG CGATTCATTC GGTGGTGTTC 
GGCGGCTTCG CGGCGCCGAA TCTCGCGGCC CGCATCGACG ACGCAAAGCC GGTCCTGATC 
GTCACCGCCG ACGCCGGCGC GCGCGGCGGC AAGGTGATCG ACTACACACC GCTGATGGAC 
GAGGCGCTCG CCCGCGCCCA ACACAAGACG CCGCGCGTTC TGCTGATCGA CCGGCAACTC 
GCGCCCGAGC GGCTCAACGC CAGCTACCTG GTCGCCTACG AACCGCTGCG CGAGCAGTTC 
TTCGACGCCC ACGTGCCGTG CGAATGGCTC GAATCGAACG AGCCTTCCTA CGTGCTGTAC 
ACGTCGGGCA CGACCGGCAA GCCGAAGGGC GTGCAACGCG ACGTCGGTGG CTACGCGGTC 
GCGCTGGCGG CTTCGATGGA ACACATCTTT CAGGGCAAAG CGGGCGACGT GATGTTCACG 
GCGTCGGACG TGGGCTGGGT GGTCGGCCAC AGCTATATCG TCTACGCGCC GCTGATCGCG 
GGCCTCACCA CCGTGATGTA CGAAGGCACG CCGATCCGTC CGGACGGCGG CATCTGGTGG 
CGTCTCGTCG CGCATCACCG GATCAATCTG ATGTTCACCG CGCCGACCGC CTTGCGCGTG 
CTGAAGAAGC AGGACCCGGC GCTGCTGAAG CAGGCGGACC TGACGAGCCT GCGCGCGCTG 
TTCCTCGCCG GCGAGCCGCT CGACGAACCC ACCGCCGCCT GGATCGCCGG CGCGCTCGAC 
AAGCCGGTGA TCGACAACTA CTGGCAGACC GAGACCGGCT GGCCGATGCT GGCGATTCCG 
CGCGGCGTCG AAGCACTGCC GACCAGGCTT GGCTCGCCGG GCGTGCCGTC GGCGGGATTC 
AACCTGACCT TGCGCAACGA GCTCACCGGC GAGCCCTGCC CGCCCGGCGA GAAAGGCGTC 
CTGACGCTGG ACTATCCGCT GCCGCCCGGT TGCATGTCGA CGGTATGGGG CGACGACAAA 
CGCTTCGTGA GCACTTACTG GTCGAGCATC CCAAACCAGC AGGTCTATTC GACCTTCGAC 
TGGGGCGTGC AGGACGAAGA CGGCTACGTG ACGATCCTCG GCCGCACCGA CGACGTGATC 
AACGTCGCCG GCCACCGGCT CGGCACGCGC GAGATCGAGG AAGCGTTGTC GAGCCACGCG 
GCCGTGGCGG AGGTCGCGGT GGTCGGCGTT ACCGATCCTT TGAAGGGCCA GGCGGCGATG 
GCCTTCGTGG TGCTGCGCGA CGCGCAGGCT TACGCGGACA CGAAAAAGCG CAGCAAACTG 
GACGCCGAAC TCACGGCGAC GGTAGACCGC CAGCTCGGCG CGATTGCGCG GCCGTCACGG 
GTCGTGGTGG TGCCCATGCT GCCGAAGACA CGCTCCGGCA AGCTGCTGCG CCGCGCGATC 
GCGGCGCTCG CCGAGGGACG CGAGCCTGGC GATCTGCCGA CCATCGAAGA TCCGGCCGCG 
TTGCAGCAGG TGCGCGAGGC ATTGGACGAC GGTGCGGGGA AGTAG 

 

Protein sequence

MTSYRDFHRR SIEDPEAFWR DEARRIHWHT PFDTVLDRSN PPFARWFVGG RTNLCHNAVD 
RHLAERAQQN ALVYVSTETG IERRYTYAEL YGEVNRMAAV MRSLDVKRGD VVLLYLPMIP 
EALFAMLACA RLGAIHSVVF GGFAAPNLAA RIDDAKPVLI VTADAGARGG KVIDYTPLMD 
EALARAQHKT PRVLLIDRQL APERLNASYL VAYEPLREQF FDAHVPCEWL ESNEPSYVLY 
TSGTTGKPKG VQRDVGGYAV ALAASMEHIF QGKAGDVMFT ASDVGWVVGH SYIVYAPLIA 
GLTTVMYEGT PIRPDGGIWW RLVAHHRINL MFTAPTALRV LKKQDPALLK QADLTSLRAL 
FLAGEPLDEP TAAWIAGALD KPVIDNYWQT ETGWPMLAIP RGVEALPTRL GSPGVPSAGF 
NLTLRNELTG EPCPPGEKGV LTLDYPLPPG CMSTVWGDDK RFVSTYWSSI PNQQVYSTFD 
WGVQDEDGYV TILGRTDDVI NVAGHRLGTR EIEEALSSHA AVAEVAVVGV TDPLKGQAAM 
AFVVLRDAQA YADTKKRSKL DAELTATVDR QLGAIARPSR VVVVPMLPKT RSGKLLRRAI 
AALAEGREPG DLPTIEDPAA LQQVREALDD GAGK