Gene Bphyt_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2794 
Symbol 
ID6280891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3153302 
End bp3154561 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID642622356 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001896412 
Protein GI187924770 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.572754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.513078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA GCCTCGATAA AAGCGCCCTC GCCGGCGGAG CTGGAACAGG AACCGGCTCG 
GCCGCCGCCG CGCAGCCCGC CGCCAAAGCG CAGCGCACGG TGTACTCCGT GCTCGGCGCG
ATCAGCTTCT CGCATCTGCT CAACGACATG ATCCAATCGT TGATCCTGGC GATCTACCCG
ATGCTGAAGG ACAACTTCTC GCTGTCGTTC GGTCAGATCG GTCTGATCAC GCTGACCTAT
CAGATCACTG CGTCGCTGCT GCAGCCGCTG GTCGGTAGTT ATACGGACAA GCATCCGAAG
CCGTATTCGC TGCCCGTCGG CATGGGCTTC ACGCTCGCGG GTCTGCTGCT GATGTCGGTC
GCGCCCAGCT TCGGCGTGCT GCTGGTGGCA GCCGCGCTGG TGGGCTGCGG TTCGTCGGTG
TTTCATCCGG AGTCGTCGCG GGTCGCGCGC ATGGCGTCGG GCGGCCGGCA CGGGCTCGCG
CAGTCGCTGT TCCAGGTGGG CGGCAATGCG GGTTCGTCGC TCGGGCCGCT GCTCGCCGCG
TTGATCGTGA TTCCGCACGG CCAGCGCAGC ATCGCGTGGT TTTCGGTGGC CGCCCTCGTC
GCGATCGTCG TGCTGACGCA GATCGGCCGC TGGTACAAGG CGCATCCGTC GGTGAAGAAA
GCGCGCAGCG TCGCCGGTCA CGCCACGCTG TCGCGCAACA AGGTCATGTT CGCGATGGGC
GTGCTGATCC TGCTGGTGTT CTCGAAGTAC TTCTATCTCG CCAGCATCAA CAGCTACTTC
ACCTTCTATT TGATCGACAA GTTCCATCTG CCGGTGCAGG CCGCGCAGGT TCATCTGTTC
GTGTTCCTCG CGGCCGTCGC GGCGGGCACG GTGATCGGCG GTCCGATCGG CGACAGGATC
GGCCGCAAGT ATGTGATCTG GGTGTCGATT CTCGGCGTGG CGCCGTTCAC GCTGCTGCTG
CCGTACGCCA ATCTGTTCTG GACCGGCGTG CTGACGGTGA TCATCGGCGT GGTGCTCGCC
TCGGCGTTCT CGGCGATCCT CGTGTATGCG CAGGAACTGA TTCCCGGCAA GGTGGGCATG
GTCGCGGGCC TGTTCTTCGG CTTCGCGTTC GGCATGGGCG GGATCGGCGC GGCGGTGCTC
GGGCAACTAG CCGATGCCAC CAGCATCACG TACGTCTATA AGGTCTGCTC GTTCCTGCCG
CTGATCGGCG TGCTGACGGT GTTCCTGCCC GATGTGGAAG GCAAGCGCGC AAAGGCGTGA
 
Protein sequence
METSLDKSAL AGGAGTGTGS AAAAQPAAKA QRTVYSVLGA ISFSHLLNDM IQSLILAIYP 
MLKDNFSLSF GQIGLITLTY QITASLLQPL VGSYTDKHPK PYSLPVGMGF TLAGLLLMSV
APSFGVLLVA AALVGCGSSV FHPESSRVAR MASGGRHGLA QSLFQVGGNA GSSLGPLLAA
LIVIPHGQRS IAWFSVAALV AIVVLTQIGR WYKAHPSVKK ARSVAGHATL SRNKVMFAMG
VLILLVFSKY FYLASINSYF TFYLIDKFHL PVQAAQVHLF VFLAAVAAGT VIGGPIGDRI
GRKYVIWVSI LGVAPFTLLL PYANLFWTGV LTVIIGVVLA SAFSAILVYA QELIPGKVGM
VAGLFFGFAF GMGGIGAAVL GQLADATSIT YVYKVCSFLP LIGVLTVFLP DVEGKRAKA