Gene Bphyt_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2782 
Symbol 
ID6283420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3139195 
End bp3141414 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content67% 
IMG OID642622344 
ProductFusaric acid resistance protein conserved region 
Protein accessionYP_001896400 
Protein GI187924758 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.747937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CCCCTGCCTC CGCCTCGCGG TCCGTGTTGA CAGCGAAGTT CGCCGCGCTC 
TACGCGGCCG CCGCCGACTG GGCCCGCAAC GACGGCCTCA CGTGGATCTA CCTTTTCAAA
GCGCTGGCCG CCTGCTTCCT CGCGCTCGGC ATTGCGATGA AGCTCGACCT GCCGCAGCCG
CGCACCGCGA TGACCACTGT GTTCATCGTG ATGCAGCCGC AAAGCGGCAT GGTGTTCGCG
AAGAGCTTCT ACCGGATCTG CGGCACTCTG GTCGGCCTTG TAGTGATGCT CGCGTTGATC
GGCCTGTTCG CGCAGCAGCC CGAACTTTTC ATCGTCACGA CGGCGATCTG GGTCGGCATC
TGTACCGCCG GCGCCGCGCG CAACCGCAAC TTCCGCTCGT ACGGTTTCGT GCTCGCCGGC
TATACCGCCG CGCTAATCGG CATTCCCGCC TCGCAGCATC CGGACGGCGC GTTTCTGAGC
GCGCTCACGC GGGTGGCCGA AGTGGTGGTC GGCATCGTTT GCGCGGGCGC GGTGAGCGGC
CTCGTGTTTC CGCAGTTCGC CGGCTTGCAG ATGCGCGGCA CCGTGCGCGC GCGGTTCTCG
GCGTTCGTCG AGTATGTGTC GGCGTCGCTC GCCGGCCGCA ACGACCGCGC GCAAATCGAA
GCGACCAATG CGCGCTTTGT CGCCGACATC GTCGGATTCG AAGCGGCGCG CAGCGTGGCC
GTGTTCGAAG GCCCTGATTC GCGCATGCGC GGCGGACGTC TCGCGCGTCT GAACAGCGAG
TTCATGACCG CGTCGACACG CTTTCACGCG CTGCATCAGT TGATGAACCG CTTGCGCAAC
ACGAACACGA GCGGCGCGGC CACCGCGATC GACGCGCTCG AACCGTACTT CAAGGAAATC
GCCCCGCTGC TCGAGAAGTC CGGCGAACCC GTGCTGAGCG CCGCCGACGC CGCGCACGCC
GCCGCGCAAC TCGAGGCCTA CAAAGCCGAG TTGCCCAAAC GCGTGCGGGC GACGCGCGCG
CAACTGGAAG CGCATCCCGA CGCGCCGCTG CTCGACTTCG ACACCGGCGC TGAACTGCTG
TACCGCTTCA TCGACGATCT GCATGCGTAT GCGGCCACGT ACGCGTCGCT CGCCGTCGAT
ACGCACGAGC GCGAGCGTTG GATCGAGCGT TACGAACCGA AGACGAACGC GATCGCGGCG
GGCGTCGCGG GTGTGCGCGC CGCCCTCGTG ATGATGGCGC TCGGCGCGTT CTGGATCGCG
ACCGCGTGGC CGAGCGGTTC GACCTTGACG CTGAATGCCG CGGCGGTTTG CGCGCTGGCG
TCGTCGTCGC CGAATCCGAA GCGCACCGCA TTCCAGATGG CCGGCGGCAC CCTGGTCGCC
ACCGTGATGG GCATGATCGC GGTGTACGGC GTGTTTCCGC ACATCGACGG CTTTCCGCTG
CTGTGCGCCG CCCTCACGCC GTTCCTGCTG CTCGGCGTGT TCATGACGAC GCGGCCCGCA
CTCGCCGGCT ACGGGGTCGG CTATTGCATC TTCTTCTGTT TCCTGGCCGG CCCGGACAAC
GTGATTCACT ACGACCCGAG CGCCTTCATG AACGACGCGA TGGCGCTGGT GCTGTCCATG
CTGGTGTCGT CGGTCGCGTT CGCGGTGTTG CTGCCGCCTT CGACTCCGTG GCTGCGCAAC
CGCCTGCTGG TGGACCTGCG CCGCCAGGTC GTGCTGGCGA GCCGCGCGGG CTTGCGTCGC
GTGAGGTCGC GCTTCGAGAG CGGCGCGCGC GATCTGATGT TCCAGATCAA CGCGCTCGCG
CAGAACGAGC CCGAGTTGAA ACGCGACACC TTGCGCTGGC TCTTCTCGGT GCTCGAAGTG
GGCAACGCGG TGATCGACCT GCGCCGCGAA GTGGCGGCGC TGCCCGCCGA CGCGCGCTAT
GCGAAGTCGA TGCCGTGGCG CGTCGCGTTG CGTTCGATGC GCGATGCGCT GGCCGCGCTG
TTCGAGCGGC CGCGTGAGGA CCGCTTCGAC CACGCGCTTG CCGCGACCGG CGACGCCATC
GCCGCCGTCC AGCAGACGCT GGCCACTTTC ACGCCGTCGC GTGAAGAACG GCATCGGCTG
CAACGCATCT TGAGTCAACT GCATTTCATT CGTACCGCGC TGCTCGATCC GCAATCGCCG
CTCGAACCGC TGATGAGCGG ACGTGCCGAC GCGTCAGAGG GAGTTCTTCA TGCCACGTGA
 
Protein sequence
MSASPASASR SVLTAKFAAL YAAAADWARN DGLTWIYLFK ALAACFLALG IAMKLDLPQP 
RTAMTTVFIV MQPQSGMVFA KSFYRICGTL VGLVVMLALI GLFAQQPELF IVTTAIWVGI
CTAGAARNRN FRSYGFVLAG YTAALIGIPA SQHPDGAFLS ALTRVAEVVV GIVCAGAVSG
LVFPQFAGLQ MRGTVRARFS AFVEYVSASL AGRNDRAQIE ATNARFVADI VGFEAARSVA
VFEGPDSRMR GGRLARLNSE FMTASTRFHA LHQLMNRLRN TNTSGAATAI DALEPYFKEI
APLLEKSGEP VLSAADAAHA AAQLEAYKAE LPKRVRATRA QLEAHPDAPL LDFDTGAELL
YRFIDDLHAY AATYASLAVD THERERWIER YEPKTNAIAA GVAGVRAALV MMALGAFWIA
TAWPSGSTLT LNAAAVCALA SSSPNPKRTA FQMAGGTLVA TVMGMIAVYG VFPHIDGFPL
LCAALTPFLL LGVFMTTRPA LAGYGVGYCI FFCFLAGPDN VIHYDPSAFM NDAMALVLSM
LVSSVAFAVL LPPSTPWLRN RLLVDLRRQV VLASRAGLRR VRSRFESGAR DLMFQINALA
QNEPELKRDT LRWLFSVLEV GNAVIDLRRE VAALPADARY AKSMPWRVAL RSMRDALAAL
FERPREDRFD HALAATGDAI AAVQQTLATF TPSREERHRL QRILSQLHFI RTALLDPQSP
LEPLMSGRAD ASEGVLHAT