Gene Bphyt_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2773 
Symbol 
ID6284523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3129978 
End bp3131291 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID642622335 
Productribonuclease BN 
Protein accessionYP_001896391 
Protein GI187924749 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGTCCA GGGTGCGTTT CGATCTCGAC ACGCTCAAAC GGCTCGCGCA ATTTGCCGCG 
CAGCGCAGCA GCGAAGACCG CATTCCGCAG GTGGCCGGCA GCCTCACGTT CACCACCATG
CTTTCGCTCG TGCCGCTCGC GACGGTCGCG TTCGCGTTGT TCACCGCGTT TCCGATCTTT
GCTTCGTTCC AGATGTCGCT GCAGATTTTT CTTGCCGACC ATCTGATGCC AGCGCAGCTC
AACAGTCAGA TTTTTAACTA TCTGAATCAG TTTGCGTCGA AGGCGAAAGG CCTCACGACC
ATCGGCATGA TCTTTCTGTT TGTCACTGCC GTGATGACGA TGATGACAGT CGAATCCGCC
TTCAATGTGA TCTGGCGCGT GCGCAAAGCG CGGCCGATCG CGCAGCGCAT TCTGGTGTAT
TGGGCAATCA TCACGCTGGG CCCGATTCTG ATCGGCGTCA GTTTGTCGAT ATCGTCGTAT
CTGTTTACGC AGTCCATGAC CTTCACGGCG GCGCAGCGCA TGACGCCCGT CATCGAGTGG
GCACTTACCG GCGCCGCGCT GCCGCTCACT GCGGTCGCTT TCACGATTCT CTACGTCTAC
CTGCCGAATT GCCGTGTGGA ATGGCGCGAC GCGGTGATTG GCGGCGTGAC CGCGGCGATC
GCCTTCGAAC TGGCGAAGCG CGGCTTCGGC TATTACGTGC GGCGTATTCC GACCTACACC
GCGGTGTACG GCGCATTCGC GGCCGTGCCG CTATTTCTGG TGTGGATGTA CCTGTGCTGG
TTCATCACGC TCGCGGGCGC AATGATCGCG TCCGCGTTGC CGGCCATTCG CATCGGCCAG
TTTCACCGGC CCACCTTCGA GGGCAGCAAT CTGTTCGACT CGCTCGAACT GCTCGCACGC
CTCTCGGAAG CGCGTGAAGC AGGTAAGCGC GGCTACACCG TACCCGAACT TTCGCGGATG
CTTCGGCGCG ATATGGACAC CACGATCAAC CTGCTGCAAA AGCTCGAGGA GATCGAATGG
ATCGCGCGCT TGCAGGAGGA CGGGCTGCGT CCGCATTTCC TGCTGCTGGC AAATCCGGCG
CAAATCACAG TGGAGCGCCT GTTCGAAATG TTCGTGATCG ACCGCGCGGA ACTCGAGTAT
CAACTCCAGC TGGCGTCCAC CCGCGTGGAT GGCGAGATGC TGCTGGCGGC GCTGGAAAAC
GACAAGCTGA AAGTCACACT TGCCGCATTG CTGGCGGCGC GCGCGGCCGC TCGCGCGGCG
CGCGCCGAGC AGAGCGAACC CGGCACGCCT TCCATGCCGC ATCAGGCTGC TTGA
 
Protein sequence
MLSRVRFDLD TLKRLAQFAA QRSSEDRIPQ VAGSLTFTTM LSLVPLATVA FALFTAFPIF 
ASFQMSLQIF LADHLMPAQL NSQIFNYLNQ FASKAKGLTT IGMIFLFVTA VMTMMTVESA
FNVIWRVRKA RPIAQRILVY WAIITLGPIL IGVSLSISSY LFTQSMTFTA AQRMTPVIEW
ALTGAALPLT AVAFTILYVY LPNCRVEWRD AVIGGVTAAI AFELAKRGFG YYVRRIPTYT
AVYGAFAAVP LFLVWMYLCW FITLAGAMIA SALPAIRIGQ FHRPTFEGSN LFDSLELLAR
LSEAREAGKR GYTVPELSRM LRRDMDTTIN LLQKLEEIEW IARLQEDGLR PHFLLLANPA
QITVERLFEM FVIDRAELEY QLQLASTRVD GEMLLAALEN DKLKVTLAAL LAARAAARAA
RAEQSEPGTP SMPHQAA