Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2757 |
Symbol | |
ID | 6283949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3111788 |
End bp | 3114031 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622319 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001896375 |
Protein GI | 187924733 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.672995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG AAACCGTTAC TAACGCGCCG AACCCCCTTC CTTCATTCGA TGAAGCGATG GCGTTCGTGC GCGAACATGC GGGCGAGGTG CGGCTGTCGT CGGGCGAAAT GCTGGCGGAT CACGCGGCGG GTACGGCGTC GATCATGCGC AAGCTCAACG TCGATCCGCC GGCGGTGCTG GCGGCGGCGC TGTTTGCATT GACGCCGCAT CTGCAGGACC CGGAGCGCGT GATCGCCGAC AACTTCGGCG AAGAAGTTGC GCAACTGGTC GGCGACGTGC GCAAGTTGTT GCGTCTCGGC ACCGTGAGCT TGCGTGCCGC ACAGAATGCC ATGCCCGAAG CCGGGCGCGA TGCGCAAGCC GCGCGCCGCG CGCAGGTCGA GGCGCTGCGC AAGATGCTGC TCGCCTTCGC GCAGGATATC CGGGTGGTGC TGATCCGGCT CGCGTCGCGA CTGCAGTCGC TGCGTTACTA CGCGGCGGCG AAAATCACGC CTTCGCCGGA CGTGGCGCGC GAGACGCTCG ATATCTATGC GCCGCTCGCC AATCGCCTGG GCATCTGGCA GTTGAAGTGG GAACTCGAGG ATCTCGCATT ACGCTTCGAA GAGCCGGTCA CATATAAGCG CATCGCCAAG TTGCTCGACG AGAAACGCGT CGAGCGCGAG AGCTATGTCG CGCAGGCTAT CGAGCGCCTG CAAAAGGAAT TGGCCGCAGC GAATATTCGT GCGGAAGTGA GTGGTAGGCC GAAACATATC TACAGCATCT GGCGCAAGAT GCGCGGCAAG GAGCTGGACT TCGCCGAGCT TTACGACGTG CGAGCGTTTC GCGTGATCGT GCCGGACATC AAGGATTGCT ACACGGTGCT CGGCATCGTG CACAACCTGT GGCAACCGGT GCCGAAAGAG TTCGACGACT ACATCTCACG ACCGAAGCCT AATGGCTACA AGTCGCTGCA CACGGTGGTG ATCGGCGACG ATGGCCGCGC GTTCGAAGTG CAGATCCGTA CGCAGGAAAT GCATCAGTTC GCCGAATACG GCGTGGCCGC GCATTGGCGT TACAAGGAAG CCGGCACGCG CGGCTACGGC GGCCAGTTCG CCGCCAACGA GAAGTACGAC GAGAAGATCG CGTGGCTGCG TCAATTGCTC GCGTGGAAGG ACGAAGTCTC CGAAGGCGAG CACGGTGAGA AGCGCGCATC GCAGCCGTGG GAACAACTGC GCCAGGCCAC GCTCGACGAC GACCACATCT ATGTGCTGAC GCCGCAGGCC CGGGTGATCC CGTTGCCGCA CGGCGCCACG CCTGTCGATT TCGCGTACCA CTTGCATAGC GAGTTGGGGC ACCGTTGCCG GGGCGCGCGC GTCGACGGCG CGATGGTGCC GCTGAACACG CCTTTGCAAA ACGGTCAGAC GGTGGAGATC GTCGCGGTGA AGGAGGGCGG TCCGTCGCGC GACTGGCTCA ACCCGCAACT CGGCTATCTG CAAAGTCCGC GAGCGCGGCA GAAGGTGCGC GCCTGGTTCA ATGCGGTCGA ACTGCAGGAA CATATCGCGA GCGGCCGTGC GATGGTCGAA AAGACCTTGC AACGCGAGGG CAAGACGTCG GTCAATCTGG ATCAGCTCGC GGCCAAGCTC GGCTTCAAGA CCACCGACGA TCTGTTCTCG GTGGTGGGCA AGGAAGAATT CAGTTTGCGG CTCGTCGAGC AGGCGCTGCA TGATGCGCCG CCGCCGGAAC CGGTGGTCGA AGCGCCGGAG CAGTTCGAGA AGCGTAGCAG CGGCGCGAGC GTGGCGCGTG GAGCGTCCAC GGGCGTGCTG GTGGTCGGCG TGGATGCGTT GCTCACGCAA CTCGCGCGCT GCTGCCGGCC CGCGCCGCCC GACGATATCT GCGGCTTTGT TACGCGCGGC AAAGGCATGT CCATTCACCG CAGCGATTGC CCGACGTTTC TGCGCATGGC GGACCGGGCG CCCGAGCGCG TGTTGCAAAC GGCGTGGTCG GCGGAGGTGA TGAGCGGCCG TGGCCAGTCG GTCTATCCGG TCGATCTCTC GATCGATGCA ACGGATCGGC AGGGCCTGCT GCGCGATATT TCCGAAGTGT TCGCGCGCGA GAAGATGAAC GTGATCGGCG TGAAAACGCA GACGCGACGT AACGCCGCGT TCATGCAATT TACCGTCGAG GTGTCGAGCG CGGCGCAGAT TCAGCGCGCG TGTACGCTGC TCGGCGAAGT CACGGGCGTG GTGCGCGCTT CACGCAAGAG TTGA
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Protein sequence | MNTETVTNAP NPLPSFDEAM AFVREHAGEV RLSSGEMLAD HAAGTASIMR KLNVDPPAVL AAALFALTPH LQDPERVIAD NFGEEVAQLV GDVRKLLRLG TVSLRAAQNA MPEAGRDAQA ARRAQVEALR KMLLAFAQDI RVVLIRLASR LQSLRYYAAA KITPSPDVAR ETLDIYAPLA NRLGIWQLKW ELEDLALRFE EPVTYKRIAK LLDEKRVERE SYVAQAIERL QKELAAANIR AEVSGRPKHI YSIWRKMRGK ELDFAELYDV RAFRVIVPDI KDCYTVLGIV HNLWQPVPKE FDDYISRPKP NGYKSLHTVV IGDDGRAFEV QIRTQEMHQF AEYGVAAHWR YKEAGTRGYG GQFAANEKYD EKIAWLRQLL AWKDEVSEGE HGEKRASQPW EQLRQATLDD DHIYVLTPQA RVIPLPHGAT PVDFAYHLHS ELGHRCRGAR VDGAMVPLNT PLQNGQTVEI VAVKEGGPSR DWLNPQLGYL QSPRARQKVR AWFNAVELQE HIASGRAMVE KTLQREGKTS VNLDQLAAKL GFKTTDDLFS VVGKEEFSLR LVEQALHDAP PPEPVVEAPE QFEKRSSGAS VARGASTGVL VVGVDALLTQ LARCCRPAPP DDICGFVTRG KGMSIHRSDC PTFLRMADRA PERVLQTAWS AEVMSGRGQS VYPVDLSIDA TDRQGLLRDI SEVFAREKMN VIGVKTQTRR NAAFMQFTVE VSSAAQIQRA CTLLGEVTGV VRASRKS
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