Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2746 |
Symbol | |
ID | 6282176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3100980 |
End bp | 3101804 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622306 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001896364 |
Protein GI | 187924722 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.881679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA AGACGCCCGA CGCGCCGCCG GAAGCCTCTC CGGAACCGGA TGAGACGCCG GATGCGCTGT TCAATCAGTC GCTGGAGAAG GGAATCGCGG TGCTACGCGC GTTCAGCGCG CAGCGCCGGT CGATGACGCT GCCCGAAGTC GCGGAAGCGA CGTCGATTAC CAAAAGCTCT GCGCAGCGCA TGATCTACAC GCTGGAGAAG CTCGGCTACG TGAGAAAGCA TCCGCGTACG AAGCGGTATC AGCTCGCGCC GCGTGTGATG CAAATCGGTT TCAACTATCT TGCCGCCGAC ACGCTGATCG ACGTCGCCAA CCCGTTTCTG TCCGAACTCA CCAATGTCAC CGGGGAGACC ACCAATCTGA CCGAGCCGGA CGGCGTCGAC ATGGTCTACG TTGCACGCTT CGTCTGTACG AAGTTCGTGC CCATTCATAT GCCGATAGGC AGCCGTATTC CGATGTACTG CACGGCGTCG GGGCGGGCTT ATCTCGCGGC GCTGCCGGAC GACGAGTCAC GCGCGCTGCT GGTGGCCAGC GATCGCGTGA CGCACACGCA GTACACCGTC ACGGATCTCG AGGAGATCGG CACGCGTCTT GTGCTTGGGC GGCGCAATGG TTATGCGTCG AACCGCGAGG AGTTGTTTAT CGGCGATATG ACCATCGCGG CGGCGGTGCT CGACGGCGAG CGCCGCCCGG TCGGCGCGGT TCACGTCGTC GCGCCGACGA GCCGCTGGAC GCTGGCGGAC GCCGAAGCGC GGCTGGCGCC GGCGGTGATC GATTGCGCGC GTGGTATCAG TAGTTCGATC AGGACACTGG TTTGA
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Protein sequence | MTRKTPDAPP EASPEPDETP DALFNQSLEK GIAVLRAFSA QRRSMTLPEV AEATSITKSS AQRMIYTLEK LGYVRKHPRT KRYQLAPRVM QIGFNYLAAD TLIDVANPFL SELTNVTGET TNLTEPDGVD MVYVARFVCT KFVPIHMPIG SRIPMYCTAS GRAYLAALPD DESRALLVAS DRVTHTQYTV TDLEEIGTRL VLGRRNGYAS NREELFIGDM TIAAAVLDGE RRPVGAVHVV APTSRWTLAD AEARLAPAVI DCARGISSSI RTLV
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