Gene Bphyt_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2722 
Symbol 
ID6281108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3075425 
End bp3077011 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content63% 
IMG OID642622282 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001896340 
Protein GI187924698 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG ACAACAACAA GGTGCGTTTT TCGCACAACG ACGACAGGGT CGTCGTGATC 
ATCGGCTCCG GCGCGGGCGG CGGCACGCTC GCCAACGAGC TGGCGCAGAA GGGCATCAAC
GTCGTGGTGC TGGAAGCGGG CAAGCTGCAT ACGCAGGGCG ATTTCACGAC CGACGAATGG
GGCGCGTTCC AGATGCTGTC ATGGCTCGAC AAACGCACCA CGTCGGGCAG TTGGCGCATC
GCCAAGGACT TCCCGAATCT GCCCGCGTGG ATCTGCAAGA CGGTGGGCGG CACGACCACG
CACTGGGCCG GCGCGAGTCT GCGCATCCAG CCGTACGAGT TCAAGGCAAA GACGACCTAC
GGCGATATCA AGGACGCCAA TCTGCTCGAC TGGCCGGTTA CGCGTGAAGA ACTCGATCCA
TACTACGACC GCGCTTCGCA GAAAATGGGC GTGACGCGCA CCAATGGTTT GCCGGGCCTG
CCGGGCAACA ACAACTTCAA GGTAATGTCG GCCGGCGCGA TGAAAGTCGG CTACAAGGAT
TGCAATACCG GCCACATGGC GATCAATAGC GTGGTGCGCG ACGACCGCGC GCATTGCTTC
CAGCGCGGCT TCTGTTTTCA GGGCTGCCGT ACGGGCGCGA AGTGGTCGAC GCTCTACACC
GAATTGCCGC GCGCTCAGGC AACCGGCCAT ATGGAGTTGC GCACACAGGC CCACGTGGTG
CGTATCGAAA CCGATGCGCG CGGCAAGGCG AAGGAGGTGC TCTATTACGA CGGCAACGGC
AAATTGCAGC GGCAGAAGGC ACGCGTTGTC GCGGTGGCCG GCAACTCGAT CGAGACGCCG
CGGCTGTTGC TGAACTCGCA TTCGAGCAAA TTCCCGCAGG GGCTCGCGAA CGGCTCGGGC
CAGGTGGGCC GCAACTATAT GCGTCACACC ACGGGCTCGG TGTATGCGGT GTTCAACGAC
AAGGTGGAGA TGTTCAAGGG CACCACGATG GCCGGCATCA TCGAGGACGA AGCGGTGTTC
AATCCGCAGC GCGGCTTCGC GGGCGGCTAC CACATGGAGA CCGTGTCGCT CGGCCTGCCG
TTTTACGCGG CCTTTCTGAA TCCGGGCGCA TGGGGGCCGA CCTTCAGCCA GGCGATGGAT
CAATACGCGT ACACGGCGGG CATGTGGATC GTCGGTGAGG ACATGCCGCG CGAGAGCAAT
CGCGTGACCT TGAACACGGA CGTGAAGGAT CAGTACGGCC AGCCGGTCGC CAACGTGCAT
TTCGACGATC ACCCGAACGA CGAAGCGATG CGCGACCACG CCTACAAGCA GGGCACGGCA
GTGTATGAAG CGGCGGGCGC GAAGACGGTG TATCGCGTGC CGCCGTATCC GTCCACGCAC
AATCTCGGCA CCGCCCGCAT GAGCGCGCGC GCCGAAGACG GTGTGTGCAA CCGCTTCGGC
CAGACGCATG AAGTGTCGAA CCTGTTCATT TCGGATGGCA GCCAGTTCAC CACCGGCGCG
GCGGAAAATC CGACCCTGAC GATCGTCACA CTGGCGATTC GTCAGGCGGA TCACATCGCG
GGGCAGATGA ATAAACGCGC GGTGTAA
 
Protein sequence
MDQDNNKVRF SHNDDRVVVI IGSGAGGGTL ANELAQKGIN VVVLEAGKLH TQGDFTTDEW 
GAFQMLSWLD KRTTSGSWRI AKDFPNLPAW ICKTVGGTTT HWAGASLRIQ PYEFKAKTTY
GDIKDANLLD WPVTREELDP YYDRASQKMG VTRTNGLPGL PGNNNFKVMS AGAMKVGYKD
CNTGHMAINS VVRDDRAHCF QRGFCFQGCR TGAKWSTLYT ELPRAQATGH MELRTQAHVV
RIETDARGKA KEVLYYDGNG KLQRQKARVV AVAGNSIETP RLLLNSHSSK FPQGLANGSG
QVGRNYMRHT TGSVYAVFND KVEMFKGTTM AGIIEDEAVF NPQRGFAGGY HMETVSLGLP
FYAAFLNPGA WGPTFSQAMD QYAYTAGMWI VGEDMPRESN RVTLNTDVKD QYGQPVANVH
FDDHPNDEAM RDHAYKQGTA VYEAAGAKTV YRVPPYPSTH NLGTARMSAR AEDGVCNRFG
QTHEVSNLFI SDGSQFTTGA AENPTLTIVT LAIRQADHIA GQMNKRAV