Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2706 |
Symbol | |
ID | 6284156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3059799 |
End bp | 3060260 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622267 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_001896325 |
Protein GI | 187924683 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.253512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGCT ACGACCGGCT GCACACGCGC GGCCTCAAGC TCCCGCAAGT GCCGACGCCG ATCGGCAATT TCACGCACTG CACACGCGAG GGCAATCTGC TGTTCCTGTC CGGCCAGGGT CCGCTCGACG AAACCGGCTC GCTGATGACC GGCAAGGTCG GCGCTACGGT CAGCGCGGAC GAAGCCTACC GGCATGCGCA AATGGTCGGA CTCAATCTGC TGGCGGTGCT GCACGACGAA CTCGGCGATC TGCGCCGCGT GAAGCGCATC CTCAAACTGC TCGGCATGGT CAACGCAGCG CCGGATTTCA CCGAGCATCC GCGCGTGATC AACGGCTGCT CGGATCTCTT CGTCGATATA TTCGGCGACG CCGGTCGCCA CTCGCGCTCC GCGGTCGGCG TGGGCTCGCT GCCGGGCAAT ATTACCGTCG AGATCGAGGC CATCGTCGCG ATCCAGGATT GA
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Protein sequence | MNCYDRLHTR GLKLPQVPTP IGNFTHCTRE GNLLFLSGQG PLDETGSLMT GKVGATVSAD EAYRHAQMVG LNLLAVLHDE LGDLRRVKRI LKLLGMVNAA PDFTEHPRVI NGCSDLFVDI FGDAGRHSRS AVGVGSLPGN ITVEIEAIVA IQD
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