Gene Bphyt_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2706 
Symbol 
ID6284156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3059799 
End bp3060260 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID642622267 
ProductEndoribonuclease L-PSP 
Protein accessionYP_001896325 
Protein GI187924683 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGCT ACGACCGGCT GCACACGCGC GGCCTCAAGC TCCCGCAAGT GCCGACGCCG 
ATCGGCAATT TCACGCACTG CACACGCGAG GGCAATCTGC TGTTCCTGTC CGGCCAGGGT
CCGCTCGACG AAACCGGCTC GCTGATGACC GGCAAGGTCG GCGCTACGGT CAGCGCGGAC
GAAGCCTACC GGCATGCGCA AATGGTCGGA CTCAATCTGC TGGCGGTGCT GCACGACGAA
CTCGGCGATC TGCGCCGCGT GAAGCGCATC CTCAAACTGC TCGGCATGGT CAACGCAGCG
CCGGATTTCA CCGAGCATCC GCGCGTGATC AACGGCTGCT CGGATCTCTT CGTCGATATA
TTCGGCGACG CCGGTCGCCA CTCGCGCTCC GCGGTCGGCG TGGGCTCGCT GCCGGGCAAT
ATTACCGTCG AGATCGAGGC CATCGTCGCG ATCCAGGATT GA
 
Protein sequence
MNCYDRLHTR GLKLPQVPTP IGNFTHCTRE GNLLFLSGQG PLDETGSLMT GKVGATVSAD 
EAYRHAQMVG LNLLAVLHDE LGDLRRVKRI LKLLGMVNAA PDFTEHPRVI NGCSDLFVDI
FGDAGRHSRS AVGVGSLPGN ITVEIEAIVA IQD