| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2703 |
|---|
| Symbol | |
|---|
| ID | 6284153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3056285 |
|---|
| End bp | 3057403 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642622264 |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_001896322 |
|---|
| Protein GI | 187924680 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACA AGCAGATTCT CCGTACGGCC ATCGCCTTCG CAGTGGCCGG ACTCGCCGCA
CAAGCCGCGC AGGCGCAAAG CAGCGTGACG CTCTACGGTA TCGTCGACGC GGGCTTTACG
TTCACGAACA ATCAGAAGGG CGAAAAGGCC TATCAGGCGA CGCAGGGCAA TGTGCAGGGC
TCGCGCTGGG GCCTGCTCGG CACGGAAGAT CTGGGCGGTG GCAACAAGGT GATGTTCAAG
CTGGAAAATG GCTTTAGCCT GGAGACCGGC GCATTGGGCC AGGGCGGCCG CATCTTCGGT
CGTAGCGCAT GGGTCGCGCT GTCCAACAGT AAGGCCGGCA CGATCACGCT CGGCCGTCAG
TACAACAGCG TGCAGGACTA TCTGTCGAAT CTGCAGATCA ACGGCGTCGG CGCCATGAGC
CAGTACGGCA ACGCGATCTA CGACAACGAC GATATCAACA ACACTTATCG CACCAACAAC
GCGGTCAAGT ACACCACGCC GACGTATGCA GGCTTCACTG CCAACGCCAT GTACGCGTTC
TCGAACGCTG CGGGCGACTT CGCCAACAAC CGCGCATGGA GCGTCGGCGC TGATTACGTG
AACGGTCCGG TGCGTCTGGA CGCGGCGTAC TCGCTGGTCA ATCAGCCGGC TACCAGCACC
GCGGGCGCGG CGCCTTCGGA CAATTACTAC AACACCGGCT CGTCGATCAT CAGCGGTGTG
AAGCGCAATC AGGTGTGGGG CGCGGGCGGT GCGTACGTGT TCGGTCCGGC TACCGTCGCA
TTGCTCTACA CGAACTCGCA ATTCCAGTTG CTGACGGGCG GCAGCCTGCG GTTCGCCAAC
TACGAAGCCA GCCTGAAGTA CCAGTTCACG CCGGCCACGC TGCTCGCGCT CGGCTACATC
TACACGACGC AGAACACCAG CGGCACCACG GCGACCAACG CGCACTACAA CCAGTTGAGC
CTGGGCGGCG AGTACTTCCT GTCCAAGACG ACCGACCTCT ACCTGAACGG CATCTACCAG
CGCTCGTCCG GTTCGAAAGC GTGGGTTGAA GGCATTTCCA ATCCGTCGAG CAACAACGGT
CAGTTCGTGA CCGTCGCCGG CATCCGCCAC AAGTTCTAA
|
|---|
| Protein sequence | MTHKQILRTA IAFAVAGLAA QAAQAQSSVT LYGIVDAGFT FTNNQKGEKA YQATQGNVQG
SRWGLLGTED LGGGNKVMFK LENGFSLETG ALGQGGRIFG RSAWVALSNS KAGTITLGRQ
YNSVQDYLSN LQINGVGAMS QYGNAIYDND DINNTYRTNN AVKYTTPTYA GFTANAMYAF
SNAAGDFANN RAWSVGADYV NGPVRLDAAY SLVNQPATST AGAAPSDNYY NTGSSIISGV
KRNQVWGAGG AYVFGPATVA LLYTNSQFQL LTGGSLRFAN YEASLKYQFT PATLLALGYI
YTTQNTSGTT ATNAHYNQLS LGGEYFLSKT TDLYLNGIYQ RSSGSKAWVE GISNPSSNNG
QFVTVAGIRH KF
|
|---|
| |