Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2684 |
Symbol | |
ID | 6283517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3033033 |
End bp | 3033800 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622245 |
Product | ABC transporter related |
Protein accession | YP_001896303 |
Protein GI | 187924661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.924492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC TGGAAAAAAT CGACAAGTAT TTCGGCGGCC TGCGAGTGCT CAACTCGGTC GATCTGCAAC TCGCCTCGGG TAATGTCACC GCGCTGATCG GTCCGTCGGG CAGCGGCAAG AGCACGCTGT TGCGTTGCGT GAATCTGCTC GAGATTCCCG AGTCCGGTTC GCTCGAACTC GGCGATCAGC GGCTGGAGTT CAGCCGCGAC CACCGGCCTT CGCGCGAAGC GGTGCTGACG ATTCGCCGCC GCACCGGCAT GGTGTTTCAG AATTTTCAGC TGTTCCCGCA TCTGACGGTG CGGCAGAACG TGATGGAAGG CCTGCTGACC GTGCAGAAGT GGGACAAGGA CAAGGCGCGG GCTCGCGCCG ACGAATTGCT GGAAAAGGTC GGCATCGCGC ACAAAGCGGA TGCGTGGCCT TCGACGCTGT CCGGCGGCCA GCAACAGCGT GTGGCGATTG CGCGGGCGTT GGCGCCGTCG CCGGAAGTGC TGTTGTGCGA CGAGCCGACC TCGGCGCTCG ACCCCGGTCT CGCCGCGGAA GTGGTGGAGG TGCTCAAGCA ACTCGCCGTT GAAGGTATGA CCATGCTGAT GGCCACGCAC GACTTGCGGC TCGCCGCGAC GATCGCGCGT GATGTGGTGT TTCTGAATAA CGGCGTGGTG GTGGAGGCTG GACCGTCGCG CGAGATCTTC ATGCAGCCGC GTGCACCGGA AACGGAGCGT TTCGTTTCGA CGCTGACGCA TAGTCTGCCG GATGAGTGGA CGCAATGA
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Protein sequence | MIRLEKIDKY FGGLRVLNSV DLQLASGNVT ALIGPSGSGK STLLRCVNLL EIPESGSLEL GDQRLEFSRD HRPSREAVLT IRRRTGMVFQ NFQLFPHLTV RQNVMEGLLT VQKWDKDKAR ARADELLEKV GIAHKADAWP STLSGGQQQR VAIARALAPS PEVLLCDEPT SALDPGLAAE VVEVLKQLAV EGMTMLMATH DLRLAATIAR DVVFLNNGVV VEAGPSREIF MQPRAPETER FVSTLTHSLP DEWTQ
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