Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2683 |
Symbol | |
ID | 6283516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3031194 |
End bp | 3032912 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642622244 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001896302 |
Protein GI | 187924660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGA ACCCCGCTAC CAAGTATCGC TCGTTCAAGC CCGTCACCTT GACGGATCGC CAGTGGCCGT CGCGCACCAT CACGCACCCG CCGATCTGGA TGAGCACCGA CCTGCGCGAC GGAAATCAGT CGCTGTTCGA GCCGATGGAC GCGCAGCGCA AGATGCGCAT GTTCAAGACG CTGGTGCAGA TCGGCTTCAA GGAAATCGAA GTCGCGTTTC CGTCCGCTTC GCAGACCGAC TTCAATTTCG TGCGTGAACT GATCGAAGGC GGCCACATCC CCGACGACGT CACCATCGAA GTCTTGACGC AAGCGCGCGA CGACCTGATC GAGCGCACCT TCGAATCCTT GCGTGGCGTG CCGCGCGCCA TCGTCCACCT GTACAACGCG ACCGCGCCGG AATTCCGCAA GATCGTCTTC AATCTGGAAA AGAGCGGCGT GAAGGAGTTG GCGCAAAACG CAGCGCGCAC GATGAAACGC ATCGCCGCCA CCATGCCGGA AACGCAGTTC ACGTTCCAGT ACAGCCCGGA AGTATTCAGC GGCACCGAAA TCGAATTCGC CAAAGAAGTC TGCGACGCCG TGTTCGACGT CTGGCAACCG ACGCCGGAAC ACAAAGCCAT CGTCAATCTG CCGGCCACCG TCGAAATGTC CACGCCGAAC ATCTACGCGG ACCAGATCGA GTGGATGCAC CGCAACCTCG CGCGCCGCGA TTCGCTGATC ATCTCCGTGC ATCCGCATAA CGATCGCGGC ACCGCCGTGG CGGCGGCAGA ACTCGCCGTG ATGGCCGGCG CGGATCGTAT CGAAGGCTGT TTGTTCGGCA ACGGCGAGCG CACCGGCAAC GTGGACCTCG TCACGCTCGC GTTGAACCTG TACACGCAAG GCGTCGATCC GGGCCTCGAC TTCTCGAACA TCAACGAAGT CGCGCGTACC GCTGAAGAAT GCACGCAACT GCCGATCCAT CCGCGTCATC CGTATGTCGG CGATCTGGTG TTCACGGCCT TCTCGGGCTC GCATCAGGAC GCGATCAAGA AGGGCTTCGC GGTGCAGAAA CCGGACGCGG TCTGGGAAGT GCCCTACATG CCGATCGATC CGGCCGATCT CGGCCGCACC TACGACTCGG TGATTCGCGT GAACAGCCAG TCGGGCAAGG GCGGCATCGC GTATCTGCTC GAACAGGGCT ACGGCGTCGT GTTGCCGCGC CGCTTGCAAG TGGACTTCAG CTCGGCCGTG CAGCGCTTCA CCGACGACAG CGGCCAGGAA GTCACGTCCG CGCAGATCTG GGAATTGTTC CAGCAGGAAT ATGTGCAGAA CACGGCGCCG ATTCATTATG TGGGCCACAG CCTGTCCGAG CGCGAAGGAC GCGAGCGCAT CAAACTGACG GTCGACATCC ACGGCACGCG GCGTGTGTTG ACCGGCGAAG GCAATGGCCC GCTCGACGCG TTGATGCACG CGATCGGCGT ACCGGTGCGG ATTCAGCACT ATGAAGAGCG TGCGTTGACG CAGGGCGCGG ATGCCCGAGC GGTGGCCGTC GCTGAAATGG CCGGCGCCGA TGTGACCGGC AGCGCGTTCG GCGTCGGCAT CGACGCCAAT CTGGTGACGG CGTCGATTCG CGCGGTGATC AGCGGGGTGA ATCGCGCTTA TGCTCGAGTC AATGCGCAGG CGCAGGAGAA CTTCTTCGAC GCTGCGATGA ACGATGCCGC GGAGAGCGTG GGCGTTTAA
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Protein sequence | MLKNPATKYR SFKPVTLTDR QWPSRTITHP PIWMSTDLRD GNQSLFEPMD AQRKMRMFKT LVQIGFKEIE VAFPSASQTD FNFVRELIEG GHIPDDVTIE VLTQARDDLI ERTFESLRGV PRAIVHLYNA TAPEFRKIVF NLEKSGVKEL AQNAARTMKR IAATMPETQF TFQYSPEVFS GTEIEFAKEV CDAVFDVWQP TPEHKAIVNL PATVEMSTPN IYADQIEWMH RNLARRDSLI ISVHPHNDRG TAVAAAELAV MAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGVDPGLD FSNINEVART AEECTQLPIH PRHPYVGDLV FTAFSGSHQD AIKKGFAVQK PDAVWEVPYM PIDPADLGRT YDSVIRVNSQ SGKGGIAYLL EQGYGVVLPR RLQVDFSSAV QRFTDDSGQE VTSAQIWELF QQEYVQNTAP IHYVGHSLSE REGRERIKLT VDIHGTRRVL TGEGNGPLDA LMHAIGVPVR IQHYEERALT QGADARAVAV AEMAGADVTG SAFGVGIDAN LVTASIRAVI SGVNRAYARV NAQAQENFFD AAMNDAAESV GV
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