Gene Bphyt_2651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2651 
Symbol 
ID6284491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2998638 
End bp2999684 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content66% 
IMG OID642622212 
ProductABC transporter related 
Protein accessionYP_001896270 
Protein GI187924628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.220335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.549326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CCTCCATTCC AATCACGCTG ACGCAATGCG CGAAAACGTT TCGCGGCACG 
CGCGTGCTCG AACCGCTCGA CCTGCATATC GATGCCGGCG AAACGCTCGT GCTGCTCGGG
CCGTCCGGCT GCGGCAAGAC CACGACGCTG CGCATGATCG CGGGTCTGGA AACGCCGGAT
GCCGGCGGCC GCATCGCGTT CGGTGACGAC GACGTCACCG CGCTGCCGAT CGAAAAGCGC
CAGGTCGGCA TGGTGTTCCA GAGCTACGCG CTGTTTCCGA ATCTGACGGT GCGCGGCAAC
ATCGGCTACG GGTTGAAGAT CAAACGCGTG CCCGCGGAGA CGGCGCGGCA ACGCGTCGAC
GAACTGCTCG GCATGATGCG TCTCACCGCG CACGCCGACA AACCGATCGA CCAGCTTTCC
GGCGGTCAGC GTCAACGGGT GGCGCTCGCT CGAGCACTCG CCGTGCAGCC GCGCGTGCTG
TTGCTCGACG AACCGTTGAC CGCCCTCGAC GCCCGTTTGC GCGACACCTT GCGCAGCGAG
ATGAACACGC TGCTGCGCGA GTTGGGCATC ACGACCGTTT ACGTCACGCA CGATCAGGCC
GAAGCGATGG AACTCGGCGA CCGTATCGTC GTGATGAGCG CGGGGCGCAT CGAGCAGATC
GGCTCGCCGC GCGAGATCTA TTACCGCCCC GCCAATCGCA CGGTCGCGCA GTTCGTCGGC
ACCATCAACC GGCTTGCGGG CGAGCGGCGC GACGGCATGC TGAGTACCAC GGGCGGTGCA
GTGCCGCTGC CTGCGGGCTC CGCGCACGCG AACTCGGTAC ACGAGATTTT CTTCCGCCCG
GAAGACGCGT ATCTGGCCGA TCCGGCTCAC GCGCAATTGC GTGGGCATAT CGAAAGCGCC
GCGTTTCTCG GCGAGCGCAC GCGTCTGACG GTCGGCGGCG CCGCGCCGGA CGCGTTGCTG
ATCGACGTAG CCGGCCGCGT GGAATTGGCG CGCGGCACGC CGGTCGGCAT TTCCATCGCG
CAGGACGCGC TGATTGCGCT ATCGTAA
 
Protein sequence
MKLASIPITL TQCAKTFRGT RVLEPLDLHI DAGETLVLLG PSGCGKTTTL RMIAGLETPD 
AGGRIAFGDD DVTALPIEKR QVGMVFQSYA LFPNLTVRGN IGYGLKIKRV PAETARQRVD
ELLGMMRLTA HADKPIDQLS GGQRQRVALA RALAVQPRVL LLDEPLTALD ARLRDTLRSE
MNTLLRELGI TTVYVTHDQA EAMELGDRIV VMSAGRIEQI GSPREIYYRP ANRTVAQFVG
TINRLAGERR DGMLSTTGGA VPLPAGSAHA NSVHEIFFRP EDAYLADPAH AQLRGHIESA
AFLGERTRLT VGGAAPDALL IDVAGRVELA RGTPVGISIA QDALIALS