| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2651 |
|---|
| Symbol | |
|---|
| ID | 6284491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2998638 |
|---|
| End bp | 2999684 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622212 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001896270 |
|---|
| Protein GI | 187924628 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.220335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.549326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CCTCCATTCC AATCACGCTG ACGCAATGCG CGAAAACGTT TCGCGGCACG
CGCGTGCTCG AACCGCTCGA CCTGCATATC GATGCCGGCG AAACGCTCGT GCTGCTCGGG
CCGTCCGGCT GCGGCAAGAC CACGACGCTG CGCATGATCG CGGGTCTGGA AACGCCGGAT
GCCGGCGGCC GCATCGCGTT CGGTGACGAC GACGTCACCG CGCTGCCGAT CGAAAAGCGC
CAGGTCGGCA TGGTGTTCCA GAGCTACGCG CTGTTTCCGA ATCTGACGGT GCGCGGCAAC
ATCGGCTACG GGTTGAAGAT CAAACGCGTG CCCGCGGAGA CGGCGCGGCA ACGCGTCGAC
GAACTGCTCG GCATGATGCG TCTCACCGCG CACGCCGACA AACCGATCGA CCAGCTTTCC
GGCGGTCAGC GTCAACGGGT GGCGCTCGCT CGAGCACTCG CCGTGCAGCC GCGCGTGCTG
TTGCTCGACG AACCGTTGAC CGCCCTCGAC GCCCGTTTGC GCGACACCTT GCGCAGCGAG
ATGAACACGC TGCTGCGCGA GTTGGGCATC ACGACCGTTT ACGTCACGCA CGATCAGGCC
GAAGCGATGG AACTCGGCGA CCGTATCGTC GTGATGAGCG CGGGGCGCAT CGAGCAGATC
GGCTCGCCGC GCGAGATCTA TTACCGCCCC GCCAATCGCA CGGTCGCGCA GTTCGTCGGC
ACCATCAACC GGCTTGCGGG CGAGCGGCGC GACGGCATGC TGAGTACCAC GGGCGGTGCA
GTGCCGCTGC CTGCGGGCTC CGCGCACGCG AACTCGGTAC ACGAGATTTT CTTCCGCCCG
GAAGACGCGT ATCTGGCCGA TCCGGCTCAC GCGCAATTGC GTGGGCATAT CGAAAGCGCC
GCGTTTCTCG GCGAGCGCAC GCGTCTGACG GTCGGCGGCG CCGCGCCGGA CGCGTTGCTG
ATCGACGTAG CCGGCCGCGT GGAATTGGCG CGCGGCACGC CGGTCGGCAT TTCCATCGCG
CAGGACGCGC TGATTGCGCT ATCGTAA
|
|---|
| Protein sequence | MKLASIPITL TQCAKTFRGT RVLEPLDLHI DAGETLVLLG PSGCGKTTTL RMIAGLETPD
AGGRIAFGDD DVTALPIEKR QVGMVFQSYA LFPNLTVRGN IGYGLKIKRV PAETARQRVD
ELLGMMRLTA HADKPIDQLS GGQRQRVALA RALAVQPRVL LLDEPLTALD ARLRDTLRSE
MNTLLRELGI TTVYVTHDQA EAMELGDRIV VMSAGRIEQI GSPREIYYRP ANRTVAQFVG
TINRLAGERR DGMLSTTGGA VPLPAGSAHA NSVHEIFFRP EDAYLADPAH AQLRGHIESA
AFLGERTRLT VGGAAPDALL IDVAGRVELA RGTPVGISIA QDALIALS
|
|---|
| |