| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2632 |
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| Symbol | |
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| ID | 6284363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2978002 |
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| End bp | 2980308 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622192 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001896251 |
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| Protein GI | 187924609 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.930318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCG AAGCGACATC AGAAAACAAG CTGGAAGCAG CGCCTGAAGG CCGCTATGGA
TCGAATCTCG CCGAAGGCGT GGTGGCGTCG GAGCGCACGG TGTTGCGCTT GATCACCCGC
AACACGCCGC TGCCGGAATT GCTTGACGAA GTATGCCGCC GCGCTGAAGC GCTGCTGGGC
GAAGGCGCGT CCTGTTCAAT CCTGTTGCTC GACGCCGACG GCGTCCACGT CAGAGTGGGT
GGCGCGCCGT CGCTGCCGGC GCATTACAGC GCGGCGATCG ACGGCACGGC GATCGGTCCA
CGGGCCGGCT CATGCGGCAC CGCGATGTAC GAGCGGCGCC TAGTCGTCGT CGAGGATATC
GAAACCGATC CGCTGTGGGC TGACTTCCGG CACCTCGCGT TGCCGATCGG CTTGCGGGCC
TGCTGGTCGG TGCCCTTTGA AAACGATTCC GGCGTGGTGC TCGGCGCCTT CGCGGTCTAC
TACCGCGTGC CGCGCCGTCC GGGCGCCGAG GAAGAAGCGA TGCTGCGCGA CATCGGGCAC
AGCGTCGGTC TCGCCGTGCA TCAGGACACC ATGGTCCAGC GCCTCGCGCA CAGCGAGGAG
CATCACCGGC TGGTGGTCGA TCATCTGATC GAAGGAATCG TCGTGCAGTC GCGTGACGGC
GTCGTGCTCG CCTGCAATCC GAGCGCGCAG CGCATCTTGC GCGCCACCCC GCAGATCGTC
GGCCGCAGTA TTCATACGGT GATGGTGCGC GCGTATCACG AAGACGGCTC GCTCGTCGTC
GACGCTGCCC GCCCGACCGC GCAGGTGTTG AGCACCGGCA AACCGGTGCT CGGCGTGACG
ATCGGCGTGG AGCTGATCGG CGGCGACATT GTCTGGATCA CCGAGAACGT CGTGCCGATC
ATCAAGCCGG GCGAGAGCGA ACCCGGTTCG GTGCTGATCT CGTTCACCGA CATCGGACCC
GTGCGCGAGG CGCAGCGCCA ACTCAAGTTC CTCGCCACCC GCGATTCGCT CACCGGCCTC
TACAACCGCG CCTATCTCAC CGAGCGGATG CGCGACCTGT TCACGCCGCA CATGTCGTCC
GGCATGGGCG AACTGGCGAG CGTCGCCGTG CTTTTCGTCG ACCTGGACGG CTTCAAGAAG
GTCAACGACA CGGCGGGCCA CGAGGCGGGC GACTCCCTGC TCTGCAGCGT GGCGGAGCGC
CTCTCGGCGT GCATCGCGCC CGAGGACACG CTCGCGCGCG TGGGCGGCGA CGAATTCGTG
ATCGTGATCA GCGCGTATGA AAACAGCGGG CATCTGATCG GCCTCGCGCG CCGCGTTCTC
GACATGATCG CGGTGCCGTT CGCGGTGGCG GACAACGAGT ACTACCTGGG CGCGTCGATC
GGCATCAGCC GTTTTCCGGA AGACGGCCAG GACGTCGCCA CGCTCATGCG CAACGCGGAT
TCGGCGATGT ATCACGCCAA GCAGCGCGGC CGCAATAACT TCCAGTTTTT CACCGCCGAG
CTGAATCAGC ACCTGCAACG CCGCTTCACG ATCGAGCAAT CGCTGCGGCG CGCGCTCGCC
GGCAACGAAC TGAGCCTCGT CTACCAGCCG ATCGTCGACA GCCACGACGG CCGCACGATC
GGCGCGGAGG CGCTCCTGCG CTGGTACAAC AGCGAGCTGG GCAACGTGTC GCCGGGGGAA
TTCATCCCCG TGGCCGAAGA TGCCGGGCTG ATCGTCGAGA TCGGCGACTT CGTGCTGGCG
CGGGCCTGCG AGCAGGTGGC GCAATGGCGG CGCACGCTGG CGCCGGAGCT GATCGTCGCT
GTCAACCTGT CGCCGCGGCA GTTCAACGAC GGCCTGGTGG AGCGGATCGA ACGCTGTCTC
GCGCAGTCCG GGCTCGAGCC GACGGCGCTG GAGCTGGAGA TCACCGAACG GCTGCTGATG
AGCGACAGCG AAACGGTCCT GCCGATGCTG AGCGCGCTGA ACGCCATGGG CGTGCGCATT
TCCGTCGACG ACTTCGGCAC CGGCTATTCG TCGCTGTCGT ATCTGAAGCG CTTCCCGCTG
CATAACCTGA AAATCGACCG CTCGTTCGTC GCGGGTTTGC CGGATCATCG CGATTCGATT
GCGATTACTC AGGCCGTGGT GGCGATGGCG CACTCGCTCG GCATGAACGT CACCGCCGAA
GGGGTGGAAA CCGCCGAACA GGCGGCGTTC CTGCGCGCGA TCGATTGCGA CAAGCAGCAG
GGCTATCTTT ACAGCCGTCC GGTCGGGGCC AGTGCATATG CCCGCGCTTT GTGGGACGCA
CAGCTCAACG TCGCCGACGC CTCCTGA
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| Protein sequence | MTCEATSENK LEAAPEGRYG SNLAEGVVAS ERTVLRLITR NTPLPELLDE VCRRAEALLG
EGASCSILLL DADGVHVRVG GAPSLPAHYS AAIDGTAIGP RAGSCGTAMY ERRLVVVEDI
ETDPLWADFR HLALPIGLRA CWSVPFENDS GVVLGAFAVY YRVPRRPGAE EEAMLRDIGH
SVGLAVHQDT MVQRLAHSEE HHRLVVDHLI EGIVVQSRDG VVLACNPSAQ RILRATPQIV
GRSIHTVMVR AYHEDGSLVV DAARPTAQVL STGKPVLGVT IGVELIGGDI VWITENVVPI
IKPGESEPGS VLISFTDIGP VREAQRQLKF LATRDSLTGL YNRAYLTERM RDLFTPHMSS
GMGELASVAV LFVDLDGFKK VNDTAGHEAG DSLLCSVAER LSACIAPEDT LARVGGDEFV
IVISAYENSG HLIGLARRVL DMIAVPFAVA DNEYYLGASI GISRFPEDGQ DVATLMRNAD
SAMYHAKQRG RNNFQFFTAE LNQHLQRRFT IEQSLRRALA GNELSLVYQP IVDSHDGRTI
GAEALLRWYN SELGNVSPGE FIPVAEDAGL IVEIGDFVLA RACEQVAQWR RTLAPELIVA
VNLSPRQFND GLVERIERCL AQSGLEPTAL ELEITERLLM SDSETVLPML SALNAMGVRI
SVDDFGTGYS SLSYLKRFPL HNLKIDRSFV AGLPDHRDSI AITQAVVAMA HSLGMNVTAE
GVETAEQAAF LRAIDCDKQQ GYLYSRPVGA SAYARALWDA QLNVADAS
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