| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2625 |
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| Symbol | |
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| ID | 6281193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2971972 |
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| End bp | 2973483 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622185 |
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| Product | General substrate transporter |
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| Protein accession | YP_001896244 |
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| Protein GI | 187924602 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.994681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCA TGAGTTTCGT CGCAGTCATT GGAGTTTTCA CCTTGACCGC TTCCAGCAAC
GGCTTCTGGC GACACCACAA AGAAGAACAA CGCCTCTCTC TCGACGACAT CACCGTCGTC
GACAAATCTC TCCTCAAGCG GGCCGTCGGC GCCATGGCGC TCGGCAACGC GATGGAATGG
TTCGACTTCG GCGTGTATAG CTACATCGCC GTCACGCTCG GCAAAGTGTT CTTCCCGTCG
GCCAGTCCGG CTGCGCAGTT GATCGCCACG TTCGGCACGT TCGCCGCGGC GTTCCTCGTG
AGGCCGGTGG GCGGCATGGT GTTCGGGCCG CTCGGCGACC GCATCGGCCG GCAGCGTGTG
CTCGCCATGA CCATGATCAT GATGGCGCTC GGCACTTTCG CGATCGGTCT GATTCCCAGC
TACACAACGA TCGGCATTTT CGCGCCGATG CTGCTGCTGG TCGCGCGTCT GGTGCAAGGT
TTCTCGACCG GCGGCGAGTA CGGCGGCGCG GCCACCTTCA TCGCCGAATT CTCGACCGAC
AAGCGCCGCG GCTTCATGGG CAGCTTCCTC GAGTTCGGCA CGCTGATCGG CTACGTGCTC
GGCGCGGGCA CCGTTGCCGT GCTGACCGCG ACGCTCTCGA ACGACGCGCT GCTCTCGTGG
GGCTGGCGTG TGCCGTTTCT GATCGCCGGC CCGCTGGGTC TGGTGGGTCT GTACATCCGG
ATGAAGCTCG AAGAAACGCC CGCGTTCAAG AAGCAGGCCG AGCAACGCGA AGCCGAGGAC
AAAGCCGTGC CGAAGCAGTC GTTCGGTCAG TTGCTCGCGC AGCAATGGAA GCCGCTGCTG
CTGTGCGTCG GCCTCGTGCT GATCTTCAAC GTCACCGACT ACATGGCGCT CTCGTATCTG
CCGAGCTATC TGTCGGCCAC GCTGCACTTC AACGAAACGC ACGGCTTGTT CCTCGTGCTG
CTCGTAATGG TGCTGATGAT GCCGATGACG CTCGCCGCCG GCCGTCTGTC CGACACGATC
GGCCGCAAGC CGGTGATGCT GTTCGGTTGC GTGGGTCTGT TCGCGCTGTC GATTCCCGCC
CTGCTGCTGA TCCGCATGGG CACGGTGTTG CCGGTGTTCG GCGGCCTGAT GATTCTGGGC
GTGCTGCTGT CGTGCTTTAC CGGTGTGATG CCGTCGGCGC TGCCGGCGCT GTTCCCGACC
AAAATCCGCT ACGGCGCGCT GGCGATCGGC TTCAATATTT CGGTGTCGCT GTTCGGCGGG
ACGACCCCTC TCGTGACGGC GTGGCTGGTC GACCGTACCG GCAATCTGAT GATGCCCGCG
TACTACCTGA TGGGCGCGTC GCTGATCGGT ATCGTCTCGG TGGTAGCACT GCGCGAAACC
GCTCGCAAGC CGCTGCTGGG CTCGGGCCCG TGCGTTGCGA CGCGTGCCGA AGCACATGCG
GTGTTGCGCG GTGAGCGTGA AGCCGAAGAG ATGGACGAAC GTTATGCGGC TACGGCTACG
GCACGTGCCT GA
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| Protein sequence | MRIMSFVAVI GVFTLTASSN GFWRHHKEEQ RLSLDDITVV DKSLLKRAVG AMALGNAMEW
FDFGVYSYIA VTLGKVFFPS ASPAAQLIAT FGTFAAAFLV RPVGGMVFGP LGDRIGRQRV
LAMTMIMMAL GTFAIGLIPS YTTIGIFAPM LLLVARLVQG FSTGGEYGGA ATFIAEFSTD
KRRGFMGSFL EFGTLIGYVL GAGTVAVLTA TLSNDALLSW GWRVPFLIAG PLGLVGLYIR
MKLEETPAFK KQAEQREAED KAVPKQSFGQ LLAQQWKPLL LCVGLVLIFN VTDYMALSYL
PSYLSATLHF NETHGLFLVL LVMVLMMPMT LAAGRLSDTI GRKPVMLFGC VGLFALSIPA
LLLIRMGTVL PVFGGLMILG VLLSCFTGVM PSALPALFPT KIRYGALAIG FNISVSLFGG
TTPLVTAWLV DRTGNLMMPA YYLMGASLIG IVSVVALRET ARKPLLGSGP CVATRAEAHA
VLRGEREAEE MDERYAATAT ARA
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