| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2622 |
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| Symbol | |
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| ID | 6281190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2965238 |
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| End bp | 2969200 |
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| Gene Length | 3963 bp |
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| Protein Length | 1320 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622182 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001896241 |
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| Protein GI | 187924599 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.194923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.85218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGAGC CCAATCCGAT TCCGCCGATT ACTTACCCGG AAGCGCTGCC GGTTTCAGGC
CGTCGCGAGG AAATCGCCAA AGCCATTGCC CGGAATCAGG TCGTGATCGT CTGCGGCGAA
ACCGGCTCCG GTAAAACCAC CCAGCTGCCG AAAATCTGCC TCGAACTTGG GCGCGGTCTC
GGCGCGGGCG GCTCCGGGCT GATCGGCCAC ACGCAGCCGC GCCGGATCGC CGCGTCGGCG
ACCGGCCGCC GCATCGCCGA AGAACTCGGC ACGCCGTTCG GCGAAGTGGT CGGCTACAAG
GTGCGCTTCA CCGACAATCT GTCGCCGGGC GCCTCCGTCA AGCTGATGAC CGACGGTATT
CTGCTCGCCG AAACGCAAAC CGATCCGCTG CTGAAAGCGT ACGACACGCT GATCATCGAC
GAGGCGCACG AGCGCAGCCT GAACATCGAC TTTCTGCTCG GCTATCTGAA GGAAATTCTC
GTCAAGCGTC CGGATCTGAA GCTGATCGTG ACCTCAGCGA CGATCGACGC GGATCGTTTC
GCGCGCCACT TCGGCAGCGA CGAGAAACCC GCGCCGGTGA TCGAGGTGAG CGGGCGGCTG
TATCCGGTCG AGGTGCGCTA CCGGCCGGTC GCGGAAGATA GCCCCGCCGT GAAGGCCGCG
CAGGGCGATG CGCCGTCGGC GCCGCGCGGC GACCGGCCGA AATCGCAGCG CGAAACCGAT
CGCGATCTGA TGGACGCGAT CGTCGACGCC GTCGACGAAC TCTGCCGCGA AGGCCCGGGC
GACGTGCTCG TGTTCCTGCC CGGCGAGCGC GAAATCCGCG ACGCCGCCGA GGCGCTGCGC
AAGCATCATC CGCCGCATAC GGAAATTCTG CCGCTGTTCG CGCGGCTTTC CGCGGCCGAA
CAGGAGCGCG TGTTCCGCAC CTCGAACGCG CGCCGCATCG TGCTGGCCAC CAACGTCGCC
GAAACCTCGC TGACGGTGCC GGGCATTCGC TATGTGGTCG ACACCGGCCT CGCGCGCGTG
AAGCGCTACT CGTATCGCAA CAAGGTCGAG CAGTTGCAGG TCGAGTCGAT TTCGCAGGCC
GCCGCGAATC AGCGGGCCGG GCGTTGCGGC CGCGTCGCTG ACGGCATCTG CATCCGTCTC
TATGAGGAAA GCGATTATCA GAGCCGCGCG CGGTTTACGG ATCCGGAGAT TCTGCGTTCG
TCGCTGGCCT CGGTGATTCT GCGCATGAAG TCGCTCCATC TGACGGCGAT CGAGACGTTC
CCGTTCATCG AGCCGCCGCC GGGCCGCGCG ATCGCCGACG GCTATCAGCT GCTCAACGAA
CTCGGCGCCG TCGACGACGA CAATCAGCTC ACGCCGCTCG GCCGCGAACT CGCGCGCCTG
CCGCTCGATC CGCGTGTCGG CCGGATGATT CTCGCCGCGC GCGACCAGCA GGCGTTGAAG
GAAGTGCTGA TCATCGCCAG CGCCTTGTCA GTGCAGGATC CGCGCGACCG GCCGATCGAA
GCGCAGGAGC AGGCCGATCA GGCGCATCGC CGTTTCGCCG ACGATCGCTC CGAATTCCTG
CAGTGGCTGA AAATCTGGAA CTGGTTCGAA GAAGCGATCG CGCACAAGAA GTCGAACAAG
CAGCTGCACG AAGAGTGCCG CAAGAACTTC CTGTCGCAAC TGCGCCTGCG CGAATGGCGC
GACGTGCACT CGCAACTGCT GACCGTCGTG CGCGAGCACG GCTGGCGTCT GAACGAGGCG
GAAGCGACTT TCGAGCAGAT CCATCTCGCG CTGCTGACTG GCCTGCTCGG CAACATCGGC
CTCAAAGCCG ACGACGAACC GTATTACCTC GGCGCGCGGG GCATCAAGTT CTATCTGTGG
CCAGGCTCGG CGTTGGTGAA GAAGGCTGGA AAGTGGGTGA TGGCCGCCGA ACTGGTCGAG
ACGAGCCGCC TGTACGCGCG TTGCATCGCG AAGATCGAGC CGGAGTGGAT CGAGAAGATT
GGCGCGCATC TGTTGAAGAA GTCGCTTTCC GAGCCGCATT GGGAGAAGCG CGCGGCGCAG
GTCTCGGCGT TCGAGCGCGC GGTGCTGTAC GGCCTGCCGA TCTATCACCG GCGGCGCGTG
AGCTTCGGCA AACAGGATCC GGCGCGTGCC CGCGAGCTGT TCATTCGCGG CGCGCTAGTG
GAGGGCGAGT TCGATACAAA GCTCGCGTTT TTTGCTCATA ACCGCAAGCT GCTCGCCGAT
ATCGAGCAGC TTGAACACAA GTCGCGCCGC CAGGACGTGC TGGTCGACGA CGAACTGATC
TTCGCCTATT ACGATCAGGC ATTGCCGAAA GGCATTTACA CCGGCGCGTC GTTCGAACGC
TGGTATCGCG ACGAAGTGAA AAAGAGCGGC CAGCCGGAAG ACAAGCTGCG CCTGCTGTAT
TTGTCGCGTG ACGATCTGAT GCGGCACGAA GCCGCCGGCG TGACCACCGA TCTGTTCCCG
AAACGGATGA CGATGGCGGG CGTCGAGATG GCGCTCACTT ACCACTTCGA GCCGGGTTCG
CCGCGTGATG GCGTGACGCT CGCCGTGCCG CTGTATGCAC TGAATCAGGT CGACGCGCGG
CGCTGCGAAT GGCTCGTGCC TGGCATGCTG AAAGAGAAGA CGCAACTGCT GCTCAAGTCC
TTGCCTCAAA AGTTGAGGCG GCATTGCGTG CCGCTGCCCG AGTACGCCGC GGGTTTCGTC
GATCGGCACA GCGGTCCGCG CTTTGGTGCG GGCGGTTTGC TCGAGTCGCT GATCGCCGAC
GTTCGCGAAC AGACGCAAGT CGCGATGAAG CAGTCGGACT TCAAGCTCGA GACCTTGCCG
CCGCATCTGT TCATGAATTT CAAGGTCGTC GACGAGCATG GACGCCAGCT CGCGATGGGC
CGCAACATGT CGCAACTGCG CGCCGAACTC GGCGGCCAGG CGCAGCAGCA TTTTCAGAAA
ATCGCGTCGA GCGCCGCCGG GGCGGCGTTG GCGGACGCGG GCGGCGGCGG TGTCGCGACG
CCGGCGCAAA CCACCGGTGC GGCCGGCGCG GGCGCGCTGC GGGGCAAAGG CGGTGTGGGC
GCAGCGTCAG GTCCGCAGAC CGCGCCGCAG GGCGGGGCGC AGGGCACGGC GCTGTATGAA
AGGCTGACGA CATGGAATTT CGGCAAGCTT CCCGAGTTGC TCGAAATCCG TCGCGGCGGG
CAGACGTTGT TCGGTTATCC GGCGCTGGTG GATCGCGGCA CGCATTGCGA CGTCGAAGTG
TTCGATTCAC CCGACGAGGC CGCACGGATT CATCGCGCGG GATTGCGTCG GCTGTTCGCG
TTGCAGTTGA AGGAGCCGAT CAAGTATCTG GAAAAGAATC TGCCGGGTCT GCGCGAAATG
GCGATGCAGT TCATGCCGCG CGGCACGCAG GAAGAGTTGC GCGATCAGTT GATCGACACT
GCACTCGACC GCGCGTGCCT GCAAGACCCG CTGCCCGATG ACGACGTCAG TTTCCACACG
CGCCGCGACG AAGGCCGCAG CCGCCTGACC CTGCTCGCTC AGGAAATTGC CCGGCTGGTC
GGGCAGATTC TGGGCGAATA CGCGAGCGTC GCGAAGAAGC TGGTGCAGGC GAAGTCGTTC
ACGGCGGCGT ATGCCGATTT GCAGAACCAG CTCGACGGAC TGATCGGCAA GCGCTTCGTG
GTCGATACGC CGTACGCGCA ACTGGCGCAT TTCCCGCGCT ATCTCAAGGG GATCGCGCTG
CGCATCGACA AGCTGAAGGC GGACCCCGCG CGCGACGCAC GGCAGTTCGC CGAATTCCAG
CCGCTGCTGC AGAACTATCA GCGCGCCGTG GCGCAACGCG GCGGTGTGCT GGATCCGCGT
TTGTCGGAGT TCCGCTGGTT GTTGGAAGAG TTGCGGATCT CGCTGTTTGC GCAGGAGTTG
CGTACGCCGA TGCCGATTTC GGTGAAGCGG CTTTATAAAG TGTGGGAGTC GATGCAGCGC
TGA
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| Protein sequence | MVEPNPIPPI TYPEALPVSG RREEIAKAIA RNQVVIVCGE TGSGKTTQLP KICLELGRGL
GAGGSGLIGH TQPRRIAASA TGRRIAEELG TPFGEVVGYK VRFTDNLSPG ASVKLMTDGI
LLAETQTDPL LKAYDTLIID EAHERSLNID FLLGYLKEIL VKRPDLKLIV TSATIDADRF
ARHFGSDEKP APVIEVSGRL YPVEVRYRPV AEDSPAVKAA QGDAPSAPRG DRPKSQRETD
RDLMDAIVDA VDELCREGPG DVLVFLPGER EIRDAAEALR KHHPPHTEIL PLFARLSAAE
QERVFRTSNA RRIVLATNVA ETSLTVPGIR YVVDTGLARV KRYSYRNKVE QLQVESISQA
AANQRAGRCG RVADGICIRL YEESDYQSRA RFTDPEILRS SLASVILRMK SLHLTAIETF
PFIEPPPGRA IADGYQLLNE LGAVDDDNQL TPLGRELARL PLDPRVGRMI LAARDQQALK
EVLIIASALS VQDPRDRPIE AQEQADQAHR RFADDRSEFL QWLKIWNWFE EAIAHKKSNK
QLHEECRKNF LSQLRLREWR DVHSQLLTVV REHGWRLNEA EATFEQIHLA LLTGLLGNIG
LKADDEPYYL GARGIKFYLW PGSALVKKAG KWVMAAELVE TSRLYARCIA KIEPEWIEKI
GAHLLKKSLS EPHWEKRAAQ VSAFERAVLY GLPIYHRRRV SFGKQDPARA RELFIRGALV
EGEFDTKLAF FAHNRKLLAD IEQLEHKSRR QDVLVDDELI FAYYDQALPK GIYTGASFER
WYRDEVKKSG QPEDKLRLLY LSRDDLMRHE AAGVTTDLFP KRMTMAGVEM ALTYHFEPGS
PRDGVTLAVP LYALNQVDAR RCEWLVPGML KEKTQLLLKS LPQKLRRHCV PLPEYAAGFV
DRHSGPRFGA GGLLESLIAD VREQTQVAMK QSDFKLETLP PHLFMNFKVV DEHGRQLAMG
RNMSQLRAEL GGQAQQHFQK IASSAAGAAL ADAGGGGVAT PAQTTGAAGA GALRGKGGVG
AASGPQTAPQ GGAQGTALYE RLTTWNFGKL PELLEIRRGG QTLFGYPALV DRGTHCDVEV
FDSPDEAARI HRAGLRRLFA LQLKEPIKYL EKNLPGLREM AMQFMPRGTQ EELRDQLIDT
ALDRACLQDP LPDDDVSFHT RRDEGRSRLT LLAQEIARLV GQILGEYASV AKKLVQAKSF
TAAYADLQNQ LDGLIGKRFV VDTPYAQLAH FPRYLKGIAL RIDKLKADPA RDARQFAEFQ
PLLQNYQRAV AQRGGVLDPR LSEFRWLLEE LRISLFAQEL RTPMPISVKR LYKVWESMQR
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