Gene Bphyt_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2614 
Symbol 
ID6282480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2953879 
End bp2955021 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID642622174 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001896233 
Protein GI187924591 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.082338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.678018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTCA AGAATCTGAT CAAGGCAAGG AAAGGGCACG AGCAGGCGCT CTCCGACGAC 
GCTCAACTAG TCAGCTCGGG TTTGCTGCCG GGCTTCGAGG CGTTGCCGAC TGTCGTGCTG
GTGCTCGAAA AGCGCACGCT GCGCGTCGCG TTTGCGAATC CGTCGGCGGA GTCGATGCTG
GAGCTCTCGC GCCGGCAACT GACGCAAATG GCGTGGCCGG ACATCTTCTC GAATGCCGAC
GAACTGGTCG CGACTATTTC CGCGATCGCC GCCCACCGTT TTCAAGCGAC GCATCTGGAT
GCCGTGCTCG AGCGTCCGGG CCACGAGCCG CTGCATGTGC ATGCGATCGT CGGTTTCCTG
GAAGGCGCGC AAGACTACGT GCTGCTCGAA CTGTTCGAGA ACGAGCGCCA TATACGCACC
GACCGCGAGG AGCGCATCAA CGACCTCACT GCGGTCAACA AGCAACTGAT CCGCAACCTC
GCGCACGAAA TCAAGAATCC GCTCGGCGGG ATTCGCGGCG CGGCGCAACT GCTCGAGTTC
GAACTCGGCG AGCGTCAGCG CGATGAGTTG CGCGAGTACA CCCAGGTGAT CATCAAGGAG
TCGGACCGGC TGCAAACGCT GGTCGATCGA CTGCTGGAGC CGCACCGTCA TCCGCATATC
GTCGGCGACG TGAATATTCA CGAGGTGTGC GAGCGCGTGC GCCAGGTGAT CCTCGCGGAG
TTTCCGCGCG GCCTCACCAT CGAACGCGAT TACGACGTGA GCGTGCCGGA CCTGCGCGGC
GACAAGGAGC AGTTGATCCA GGCGCTCCTG AATATCGTGC GCAATGCGGC TGAAGCGCTG
CGCGAACGTA TTTCGCAGGG CGATGCGCGG ATCGAATTGC GCACCCGCGT GGCTCGCAAG
ATTACGGTGT CGAAACGCTT ATGTAAGCTG GCACTGGACT TGCATATCAC TGACAACGGC
CCAGGCATTC CCGAAGAGAT CCGTGACCGC ATTTTCTATC CGCTCGTGTC GGGGCGCGAG
GACGGCAGCG GTCTTGGACT GACGCTCGCG CAGACCTTCG TGCAACAGCA CGACGGTTTG
ATCGAAGTGG ATAGCCGCCC GGGCCACACC GAGTTTCAGA TTCTGCTGCC GCTCGACTGC
TAA
 
Protein sequence
MVLKNLIKAR KGHEQALSDD AQLVSSGLLP GFEALPTVVL VLEKRTLRVA FANPSAESML 
ELSRRQLTQM AWPDIFSNAD ELVATISAIA AHRFQATHLD AVLERPGHEP LHVHAIVGFL
EGAQDYVLLE LFENERHIRT DREERINDLT AVNKQLIRNL AHEIKNPLGG IRGAAQLLEF
ELGERQRDEL REYTQVIIKE SDRLQTLVDR LLEPHRHPHI VGDVNIHEVC ERVRQVILAE
FPRGLTIERD YDVSVPDLRG DKEQLIQALL NIVRNAAEAL RERISQGDAR IELRTRVARK
ITVSKRLCKL ALDLHITDNG PGIPEEIRDR IFYPLVSGRE DGSGLGLTLA QTFVQQHDGL
IEVDSRPGHT EFQILLPLDC