Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2612 |
Symbol | |
ID | 6281648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2950103 |
End bp | 2952202 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622172 |
Product | Prolyl oligopeptidase |
Protein accession | YP_001896231 |
Protein GI | 187924589 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.270584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAC CTCGCACTCT CACCGCTCCT TTCTCCTGGC CGCTTTCCCC CGATCCCTTT CTGTCGCTCG AAGCGCTCGA CGACCCTGAC GCGCTCGCGT GGGTCGAACA GCAGAACGCG CGCACGCGCG CCGCGTGGTG CAGCAGCGCG GAGTTCGCCT CGCTCAGGCA GCGGCTCGCC GACGCCTATC TGCCCCGCGA GCGTCCGGTG ATTCCCGACC GCTGGAAGGA TTGGGCTTAC GACCTGTGGC AGGACGAGCG CAATCCCAAG GGCATCTGGC GGCGTACGAC ATGGGCGGCA TGGCGTGGCG GCAAACCGGA GTGGCAGAAC CTGCTCGACT TCGACGCGCT CGGCGCCGCC GAAGGCACGC CGTGGGTGTG CGTGGAACTG GACATTCTCT ATCCCGATGG CGACCGCGCG CTGATCACGC TGTCGCCGGG CGGCTCGGAC GCGCTCGTGG TGCGCGAATT CGACATCGAC GCGCGACGCT TCGTCGACGA CGGTTTCGTG ATCGCGAAGG CCGGCAAGCA CACGGCGTCG TGGATCGATC GGGACACGCT TTATGTGGGC TGGGATAACG GCCGCAAGAG CTTGACGCGC TCCGGGTATC CGCGCGAAGT GCGGCGCTGG ACACGCGGCA CGGCGCTCGC CGACGCGCCT GTGGTGTTCA AGGGCGCGTT CGGCGATATC GGCGTGGAAG CACACTACGA TCCGGTCGAG CAGCGGCATA CGGTGGTGAG CAGCGTCGAT TTCTTCGATT CACACACGTA CTACCTCGAT GACGCCCACG GTGCCACCGA CGCATGGCGC CGCTACGAGG TGCCGTCGCA TGTCGCGGTG AGCGGCTGGC AAGGCTGGTT GTTGCTCGAG CCGCGACTCG ATTGGGACTG CAATGGCGCG CACTATCCGG GCGGCGCGTT GCTGGTGATT CGCGAAGATG CGTTCCTGCG CGGCGAGCGC GACGTCCTGC CGTTATTCAC GCCGACGCCG CAAACCTCGG CCTGCGAGTG GACGCATACG CTCAACCATC TGATCGTGTC GTATCTGGAG GATGTGCAGA ACAAGACCTT GCTATTGACG CCGTCGCAAG CCGACAACCA GGCGTGGCAT TGGCAGCAAC GCATCTTTCC GACGCGCGAC GACACGCAAG CCGACGTGTC GCCCGTCGAG CCGACGCTCG ACGACGAAGT GTTCGTCGAT ACCGACGACT ATCTGCAGCC GCCCGCATAC TGGCTCGCTG ATCTCGCGCG CGACGACCTG AGCGAATGGG AATTGCTCGA CCGCTGGCCG ACGCAATTCG ACGCGACGCA ATTTACCGTC ACGCGCGCTC ACGCAGTTTC CGCGGACGGC ACGCGCGTGC CGTACACCGT CGTCGGCCCA CGCGATGCGC AACAACACGC ACGCCCATGC CTGCTCAACG GTTACGGCGG CTTTGCGATT CCGTTGCTGC CGAGCTACCT CACCGGGCAA GGTATCGGCT GGCTGGCGCG CGGCGGTGTG TACGTGGTCG CGCATATTCG CGGTGGCGGC GAGTTCGGCA CGAGATGGCA TACGGCCGCG CAGGGCAAGC ATCGCCAGCG CGCGTTCGAT GATTTCATCG CGGTGGCCGA GGCGTTGATC GACACGGGTG TGACGAGCGC CGCGCAACTC GGCATTCAGG GTGGCAGCAA CGGCGGCCTG CTGGTGGCGG CGTGCATGGT GCAGCGCCCC GAGCTGTTCG GTGCCGTGGT ATGTGAGGTG CCCTTGCTCG ACATGCGCCG CTATCATCTG CTGCACGCGG GCGCGTCATG GATAGACGAA TACGGCGATC CCGACGAGCC CGATGAGGCA GGCATGCTGG CCGCTTACTC GCCGTATCAC CGCGTGGCGG CGAACGTTGC GTATCCGCCG GTGCTGTTCA CCACGTCGAC GGCCGACGAC CGTGTGCATC CCGGCCACGC GCGCAAGATG GCCGCGCGCA TGCAGGCGCT GGGCGTGGAG CACGTGTGGT ATCGGGAGAA TACGGAGGGC GGGCACGGCG GCTCCGATGA ACTGGAGCAG GCCGAGCACG ATGCGATGGT GTTCGAGTTC CTGTGGCGTA CGTTGAACCC GTCCACGTAG
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Protein sequence | MPAPRTLTAP FSWPLSPDPF LSLEALDDPD ALAWVEQQNA RTRAAWCSSA EFASLRQRLA DAYLPRERPV IPDRWKDWAY DLWQDERNPK GIWRRTTWAA WRGGKPEWQN LLDFDALGAA EGTPWVCVEL DILYPDGDRA LITLSPGGSD ALVVREFDID ARRFVDDGFV IAKAGKHTAS WIDRDTLYVG WDNGRKSLTR SGYPREVRRW TRGTALADAP VVFKGAFGDI GVEAHYDPVE QRHTVVSSVD FFDSHTYYLD DAHGATDAWR RYEVPSHVAV SGWQGWLLLE PRLDWDCNGA HYPGGALLVI REDAFLRGER DVLPLFTPTP QTSACEWTHT LNHLIVSYLE DVQNKTLLLT PSQADNQAWH WQQRIFPTRD DTQADVSPVE PTLDDEVFVD TDDYLQPPAY WLADLARDDL SEWELLDRWP TQFDATQFTV TRAHAVSADG TRVPYTVVGP RDAQQHARPC LLNGYGGFAI PLLPSYLTGQ GIGWLARGGV YVVAHIRGGG EFGTRWHTAA QGKHRQRAFD DFIAVAEALI DTGVTSAAQL GIQGGSNGGL LVAACMVQRP ELFGAVVCEV PLLDMRRYHL LHAGASWIDE YGDPDEPDEA GMLAAYSPYH RVAANVAYPP VLFTTSTADD RVHPGHARKM AARMQALGVE HVWYRENTEG GHGGSDELEQ AEHDAMVFEF LWRTLNPST
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