Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2594 |
Symbol | |
ID | 6282471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2933379 |
End bp | 2934320 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622153 |
Product | hypothetical protein |
Protein accession | YP_001896213 |
Protein GI | 187924571 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.345899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00464449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGCATC TATTCGCAAA GCGCAAGCTG CGCGCCCAAG TCCTGACATT TGCGATCGCT CTCGTTACCA CCGGCACACT GGTGCTGGCG CCGATTCTGC TGATCAGCGC GATTCCCGCC CATGCCCAGG CGCTCTATCC CAGCGCGGAC GACGCCGCCA ACGCCTTCGT CGAAGCCCTC GCCCGCAACG ACGAAGACGC GCTCAAGCGC GTGCTCGGCG GCGATTTTCA TCGCTTCATT CCGACCGATG GCATCGGCCA GGACGACATC TATCAGTTCC TCGGCGAATG GTCGAAAAAC CATCAGATCG TCAAGGATCC AGTCAGTGAC AAAGGCCGCG CCACCGCGCA TCTGACGGTC GGCGACAGCG GTTGGACCTT GCCGATTCCG CTCGTACAGT CGGGCAAGGG CTGGCGTTTC GATCCGCCGG CGGGACGCGA TGAAATGCTG ACACGCCGCA TCGGCCGCAA TGAACACGGC GCGATCCTGG CCTCGCTGGT GTATCTCGAT GCGCAATACG ACTATCGCAA CCTGACCCGG CACTATGCAC AGCGTCTCAT CAGTACGCCG GGACAGCACG ACGGCCTGTA CTGGAAGACG GCGCCCGGCG AAGCGGAAAG CCCACTTGGA CCGATCTCCG CCACCAGGCC CGACGGCACG CGGTCTGAAG AGGCGTATCA CGGCTATCGC TTCCGCATTC TCACGGCCCA AGGCGCGCAC GCGAAGGGCG GCGCCGACAA CTATGTCGAG AACGGCGTGC TGAGCAAAGG GTTCGGACTG ATAGCCTCGC CAGCCGAATA TGGCAGGACC GGCGTGATGA GTTTCATCGT CAACCAGGAC GGGCAGGTCT ATGAGAAAAA CCTCGGGCCG CGCACCACGC GCGCGGCTGC CGCCATCACG GCATTCGATC CGGGTTCCGG CTGGCAGGCG GTCGAGCCTT AG
|
Protein sequence | MMHLFAKRKL RAQVLTFAIA LVTTGTLVLA PILLISAIPA HAQALYPSAD DAANAFVEAL ARNDEDALKR VLGGDFHRFI PTDGIGQDDI YQFLGEWSKN HQIVKDPVSD KGRATAHLTV GDSGWTLPIP LVQSGKGWRF DPPAGRDEML TRRIGRNEHG AILASLVYLD AQYDYRNLTR HYAQRLISTP GQHDGLYWKT APGEAESPLG PISATRPDGT RSEEAYHGYR FRILTAQGAH AKGGADNYVE NGVLSKGFGL IASPAEYGRT GVMSFIVNQD GQVYEKNLGP RTTRAAAAIT AFDPGSGWQA VEP
|
| |