| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2592 |
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| Symbol | |
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| ID | 6282469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2929607 |
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| End bp | 2932123 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622151 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001896211 |
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| Protein GI | 187924569 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.625327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00109138 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGACCG AACGGCTTTT CGCACGCTCG GCGCGCACCG CCGGTTCGCC CGCGGATTCG
ACGCCGTCCT CCCGCTGGCA CCATGGACCA TGGTGGTCCA ATTCCTATTT GCTTACGCCG
CTTCTGTCGA TCCTGGTCTT CCTGGTCGTC ATGAGTCTGA TTTTGTGGAG CCTGAACCGG
CGCGAACAGC AACAGCAGGA AGACACGCTT TACCGTAACG TCGCATGGGC GCAGCAGCAG
ATCCGCCTGT CCATGACCGG CGCGCAGGAA CAGATCCAGG CGCTCGCGCG CGATCTGGTC
GCCGGCCGCG CCGATCCGCA TTCGTTCCAG GTGTCCACCA CGGACATCAT GCAGGGGCAT
CCCGAGATCC TCTACATGAA CTGGTACACC AGCGCGCAGC AACCGCGCTG GCCCAATACC
GCGCTGCCCG TGTTCGGCCA GCGTCTGGCC AAGCCGAACG ACGCGCAGAT GGACGAAGCC
GTCAAAGCCG CCTTCACCGA AGCGCGCAAT ACGCGCCGCC AGGTGTATTC GCCGCTCATC
TACGACGACG TCGGCAACGG CTACATCACG CTGCAAACGC CGGTGTTCCG CGACCGCGAC
TTTCTCGGCA CGATCGCCGC CGTGTTCTCG GTGGAAGGGA TCCTCAAGCA CGACATTCCG
CCTGAGCTGT CCGCCAAATA CAAAATCTCG ATCATCGACG TGAACAATCG CGAGTTGACG
ACCACGTCGA CCCGCCCGCG CCTGCCGCGC GACATGTTCT ACGATCTGCC GCTCGACCCG
CCGGGCCAGG GCGTCTCGGT GCGCGTCTAC GCGTTCCCGC AGATGACCAA CTTCACCAAC
AACACGCTGG TGTGGCTGGT GGCGGGTCTG TCCTGTTTCG TGCTGTGGAG CCTGTGGAGC
TTGTGGAAAC ACACGCGGCA ACGCTTCGAG GCGCAGCAGG CGCTGTACGC CGAAGCGTTC
TTCCGCCGCG CAATGGAAAA CTCCGTGCTG ATCGGCATGC GCGTGCTCGA CATGCATGGG
CGCATCACCC ACGTCAATCC GGCCTTTTGC CGCATGACAG GCTGGGACGA AAGCGATCTG
GTCGGCAAGA ACGCGCCATT CGCCTACTGG CCGCGCGACG CTTACCCCGA AATGCAGCGC
CAGCTCGACA TGACGCTGCG CGGCAAGGCG CCCTCTTCCG GCTTCGAATT GCGGGTGCGC
CGCAAGGACG GTTCGCTGTT CCACGCTCGT CTCTACGTGT CGCCGCTGAT CGACAGCTCG
GGCCGCCAGA CCGGCTGGAT GTCGTCGATG ACCGACATCA CCGAGCCGAA GCGCGCGCGC
GAAGAGCTCG CCGCGGCGCA CGAGCGCTTC ACCACGGTGC TCGAAAGCCT CGACGCCGCG
GTCTCCGTGC TGGCCGCCGA CGAAGCCGAG CTGCTGTTCG CCAACCGCTA TTACCGGCAT
CTGTTCGGCA TTCGCCCGGA CGGCCATCTG GAATTGGCGG GCGGCGGGTT CGATAGCGCA
CAGGCGTCGT CCGATTCGAT CGATATGGTG GACACATACG CTGGCCTGCC CGCCGCCGCG
TTGACCGAAA GCACCGCGGA TGCGCAGGAA ATTTACGTGC AGAGCATTCA GAAGTGGTTC
GAAGTGCGCC GCCAGTACAT TCAGTGGGTG GACGGCCACC TCGCGCAGAT GCAGATCGCG
ACCGATATCA CCACCCGCAA GCAGGCCCAG GAACTGTCAC GCCAGCAGGA CGAGAAGCTG
CAGTTCACCA GCCGCCTGAT GACGATGGGC GAAATGGCTT CGTCGCTCGC GCACGAACTG
AATCAACCGC TCGCCGCGAT CAATAACTAT TGCTCGGGAA CTGTGGCGCT GGTTAAATCC
GGTCGGACCA CGCCTGACAA TCTGCTGCCC GTGCTCGAAA AAACCGCCCA GCAAGCGGTG
CGCGCCGGCA TGATCATCAA GCGCATTCGC GAGTTCGTGA AGCGCAGCGA GCCGAAGCGG
CAAGCCACGC GCGTCGCCGA TATCGTCGCC GACGCCGTGG GCCTTGCCGA AATCGAGGCG
AGGAAGCGCC GCATTCGCAT CGTCACAGAT CTGCGCTCGC GCCTGCCGGT GATCTACGTC
GACCCGGTGC TGATCGAGCA GGTGCTGGTG AACCTGCTGA AGAACGCCGC CGAAGCAATG
GCCGAGGCCC GTCCGAACGC GGTCGATCCG GTGATCCGCG TGGTCGTGCG GCTGGAGAGC
GGGTTTGTCT GCTTCAGCGT CGTCGACCAG GGGCCGGGCG TCGACGAAGC GACAGCCGAG
CGGCTGTTCG AACCGTTTTA CAGCACCAAG TCCGATGGCA TGGGCATGGG GCTGAACATT
TGCCGTTCGA TTATCGAATC GCACCGGGGC CGTCTGTGGG TGGTGAACAA CGTTGAATCT
GACGGCCACA TCACAGGCGC CACGTTCCAT TGCAGTCTGC CTATTGGAGA GCCTGATGGC
CCGAGCAACG GCGGGACACA GGCGCCGACA CCACAAACCG TTACGGGAGA GCTATGA
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| Protein sequence | MLTERLFARS ARTAGSPADS TPSSRWHHGP WWSNSYLLTP LLSILVFLVV MSLILWSLNR
REQQQQEDTL YRNVAWAQQQ IRLSMTGAQE QIQALARDLV AGRADPHSFQ VSTTDIMQGH
PEILYMNWYT SAQQPRWPNT ALPVFGQRLA KPNDAQMDEA VKAAFTEARN TRRQVYSPLI
YDDVGNGYIT LQTPVFRDRD FLGTIAAVFS VEGILKHDIP PELSAKYKIS IIDVNNRELT
TTSTRPRLPR DMFYDLPLDP PGQGVSVRVY AFPQMTNFTN NTLVWLVAGL SCFVLWSLWS
LWKHTRQRFE AQQALYAEAF FRRAMENSVL IGMRVLDMHG RITHVNPAFC RMTGWDESDL
VGKNAPFAYW PRDAYPEMQR QLDMTLRGKA PSSGFELRVR RKDGSLFHAR LYVSPLIDSS
GRQTGWMSSM TDITEPKRAR EELAAAHERF TTVLESLDAA VSVLAADEAE LLFANRYYRH
LFGIRPDGHL ELAGGGFDSA QASSDSIDMV DTYAGLPAAA LTESTADAQE IYVQSIQKWF
EVRRQYIQWV DGHLAQMQIA TDITTRKQAQ ELSRQQDEKL QFTSRLMTMG EMASSLAHEL
NQPLAAINNY CSGTVALVKS GRTTPDNLLP VLEKTAQQAV RAGMIIKRIR EFVKRSEPKR
QATRVADIVA DAVGLAEIEA RKRRIRIVTD LRSRLPVIYV DPVLIEQVLV NLLKNAAEAM
AEARPNAVDP VIRVVVRLES GFVCFSVVDQ GPGVDEATAE RLFEPFYSTK SDGMGMGLNI
CRSIIESHRG RLWVVNNVES DGHITGATFH CSLPIGEPDG PSNGGTQAPT PQTVTGEL
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