| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2590 |
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| Symbol | |
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| ID | 6282467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2924895 |
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| End bp | 2926547 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622149 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001896209 |
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| Protein GI | 187924567 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.546958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000383256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTCAAG CGATCGAAGT CAAGGTGCCG GACATCGGCG ATTACAAGGA CATTCCTGTG
ATCGAGGTGC TGGTGAAGGC GGGTGACACC GTCGAAAAAG AGCAATCGCT CGTTACGCTG
GAATCCGACA AGGCGACCAT GGACGTGCCG AGCTCGGCCG CCGGCGTCGT CAAGGAAGTG
AAGGTCAAGG TCGGCGACAA CGTGTCAGAA GGTTCGCTGA TCGTCGTGCT GGAAGGTGCG
GAAGGTGGCG CGGCTGCGCC GGCTCCGGCG CCTGCCGCTG CTCCGGCTCC GTCGGCGGCT
GCGGCCCCCG CGGCTGCACC CGTCCCCGCT GCGAGCGGCG GCGGTCTGCA GGAAGTCAAA
GTGCCGGATA TCGGCGACTA CAAAGACATT CCCGTGATCG AAGTCGCGGT GAAGGTCGGC
GATCGCGTCG AGAAAGAGCA GTCGCTGGTG ACGCTCGAAT CCGACAAGGC GACCATGGAC
GTGCCGAGCT CGGCTGCCGG CGTCGTCAAG GAAGTGAAGG TCAAGGTCGG CGATACCGTG
TCGGAAGGTT CGGTGATTGT GATCGTGGAA GCGGAAGGCG GCGCGGCTGC GGCCCCCGCT
CCGGCTCCGA AGCAAGCGGT CGAGAAACCG TCGGATGCGC CGGCCACTCC GTCGCCGGCT
CCGGCGGCTC CGTCGGCGCT CGCTCAGGCG CCGGTGATTC CGGCTGGTGA AGGTGGCGCG
CGCCATGCGA GTCATGCATC GCCGTCCGTG CGTAAATTCG CGCGTGAGCT CGGTGTCGAT
GTGACGCAGG TGCAGGGCAC GGGTCCGAAG AACCGTATCA CGCAAGCCGA CGTGACCGCC
TTTATCAAGG GCGTCATGAC CGGTCAGCGT GCTGCGCCGG CTGGTGCGGC CGCACCGGCG
GCCGCGGGCG GTGGCGGCGA GTTGAACCTG CTGCCTTGGC CGAAGGTCGA CTTCACGAAG
TTCGGTCCGG TCGATCCGAA GCCGCTGTCG CGCATCAAGA AGATTTCGGG CGCGAATCTG
CATCGCAACT GGGTCATGAT TCCGCACGTC ACCAATAACG ACGAAGCGGA TATCACCGAG
CTGGAAGCGT TGCGCGTGAA GTTGAACAAG GAATACGAAA AGTCGGGTGT GAAGATCACC
ATGCTGGCTT TCGTGATCAA GGCTGTGGTC TCGGCTTTGA AGCAGTTCCC GACGTTCAAT
GCCAGCCTCG ATGGCGATAA CCTGGTGTTC AAGCAGTATT TCCATATCGG GTTTGCAGCT
GATACGCCCA ATGGTCTGGT CGTTCCTGTT ATTCGCGATG CGGACAAGAA GGGGTTGATC
GATATCGCCA AGGAAATGGC CGAGTTGTCC AAGCTCGCGC GTGACGGCAA GCTGAAGCCG
GATCAGATGC AAGGCGGCTG CTTCTCGATT TCTTCTTTGG GTGGCATCGG TGGCACGAAC
TTCACGCCGA TTATCAATGC GCCTGAAGTC GCGATTCTCG GTCTGTCGCG TGGCGCGATG
AAGCCGGTTT GGGATGGTAA GCAGTTCGTG CCTCGGCTGA CGCTGCCGCT GTCCTTGTCG
TATGACCATC GGGTGATCGA TGGTGCCGCG GCGGCCAGGT TTAATGCGTA TCTTGGGGCG
CTTCTTGCCG ATTTCCGGCG TGTGATTCTT TGA
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| Protein sequence | MSQAIEVKVP DIGDYKDIPV IEVLVKAGDT VEKEQSLVTL ESDKATMDVP SSAAGVVKEV
KVKVGDNVSE GSLIVVLEGA EGGAAAPAPA PAAAPAPSAA AAPAAAPVPA ASGGGLQEVK
VPDIGDYKDI PVIEVAVKVG DRVEKEQSLV TLESDKATMD VPSSAAGVVK EVKVKVGDTV
SEGSVIVIVE AEGGAAAAPA PAPKQAVEKP SDAPATPSPA PAAPSALAQA PVIPAGEGGA
RHASHASPSV RKFARELGVD VTQVQGTGPK NRITQADVTA FIKGVMTGQR AAPAGAAAPA
AAGGGGELNL LPWPKVDFTK FGPVDPKPLS RIKKISGANL HRNWVMIPHV TNNDEADITE
LEALRVKLNK EYEKSGVKIT MLAFVIKAVV SALKQFPTFN ASLDGDNLVF KQYFHIGFAA
DTPNGLVVPV IRDADKKGLI DIAKEMAELS KLARDGKLKP DQMQGGCFSI SSLGGIGGTN
FTPIINAPEV AILGLSRGAM KPVWDGKQFV PRLTLPLSLS YDHRVIDGAA AARFNAYLGA
LLADFRRVIL
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