| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2589 |
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| Symbol | |
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| ID | 6282466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2922827 |
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| End bp | 2924629 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622148 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001896208 |
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| Protein GI | 187924566 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.835737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000383256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTCTCG TCGAAGTAAA AGTGCCGGAT ATCGGTGACT TCAAAGACGT CGATGTCATC
GAAGTCAATA TCAAAGCGGG CGATGTCATC GAGAACGAAC AGGCTCTCAT GACGCTCGAA
TCCGATAAGG CCTCCATCGA AGTGCCGAGC GATACCGCCG GCACGGTCAA GGAAGTTCGC
GTCAAAGCCG GCGATAAAGT CTCGCAAGGC ACGGTCATCG CGCTCGTCGA AACGTCGGCG
GATGCAGCGC CCGCGAAAGA CGCACCGAAG GCGCCGGCCA AGGAACCTGA GAAGGCGCCT
GCTCAGGCGG AAGCCAAACC GCAAGCGGCG CAGGCGGCTC CGGCCAAGGC TGCCACGCCC
GCTCCGCAGG CGGGCAGCTT CTCCGGCAAC GCGGATATCG AATGCGACAT GCTCGTGCTC
GGTTCGGGCC CCGGCGGCTA TTCGGCGGCG TTCCGTTCGG CTGACCTGGG TATGAAGACG
GTGCTGGTCG AGCGTTACGC GACGCTTGGC GGCGTGTGTC TGAACGTCGG CTGTATTCCG
TCGAAGGCGC TGTTGCATAC CGCGCTCGTG ATCGACGAAG CCGAAGCGCT CCGCTCGCAC
GGCATCACGT TCGGCAAGCC GCAAATCGAT CTCGACAAGC TGCGCGACTT CAAGTCGGGC
GTCGTCAAGA AGCTCACCGG CGGTCTCGCC GGCATGGCGA AGATGCGCAA GGTCGAAGTG
GTCACGGGCA CGGGCTCGTT CGTCGATCCG CATCATATGG AAGTGCAGGT CGAGGGCGGC
AAGAAGGTCG TCAAGTTCAA GCAGGCAATC ATCGCCGCGG GCTCGGAAGC GGTGAAGCTG
CCGTTCATTC CGGAAGATCC GCGTGTCGTC GATTCGACCG GCGCGCTCGA ACTGCGGCAG
ATTCCGCAAC GCATGCTGGT GATCGGCGGC GGCATCATCG GGCTGGAAAT GGCCACGGTG
TATGCCACGC TCGGCGCGCA GATCGACGTG GTCGAAATGC TCGACGGCCT GATGGCCGGC
GCGGACCGCG ATCTGGTCAA GGTCTGGGAG AAGTACAACA GCAAGCGTTT CGCTAACGTC
ATGCTGAAGA CCAAGACCAC CGCGGCCGAA GCGAAGGACG ACGGCATCTA TGTGTCGTTC
GAAGGCGAGA AAGCGCCGGC CGAAGCGCAA CGCTATGACC TCGTGCTGGT TGCCGTCGGC
CGCTCGCCGA ATGGCAAGAA GATCGGCGCG GACAAGGCAG GCGTCGCGGT GACGGAGCGC
GGTTTCATCG ACGTCGACAA GCAGATGCGC ACTAACGTGC CGCACATTTT CGCGATCGGC
GATATCGTCG GCCAGCCGAT GCTCGCGCAT AAAGCCGTGC ATGAAGCTCA CGTCGCCGCC
GAAGTCGCAC ACGGCGAAAA GGCGTACTTC GATGCGCTGC AGATTCCGTC GGTTGCCTAC
ACCGATCCGG AAGTGGCGTG GGCCGGCAAG ACGGAAGACC AGTTGAAGGC CGAGGGCATC
AAGTACGGTA AGGCTGTGTT CCCGTGGGCC GCGTCGGGCC GCGCGATCGC CAACGGCCGC
GACGAAGGCT TCACGAAGCT GCTGTTCGAT GAGGAAACGC ATCGCGTGAT CGGCGGCGGG
ATTGTCGGTC TGAATGCGGG CGACCTGATC AGCGAAGTCT GTCTGGCGGT CGAGATGGGT
GCGGATGCAA CGGATATTGG TAAGACGATT CACCCGCATC CGACGCTCGG CGAATCGATC
GGTATGGCCG CCGAGTTGTA TGAAGGCGTC TGTACCGACC TGCCGCCGCA GAAAAAGAAG
TAA
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| Protein sequence | MSLVEVKVPD IGDFKDVDVI EVNIKAGDVI ENEQALMTLE SDKASIEVPS DTAGTVKEVR
VKAGDKVSQG TVIALVETSA DAAPAKDAPK APAKEPEKAP AQAEAKPQAA QAAPAKAATP
APQAGSFSGN ADIECDMLVL GSGPGGYSAA FRSADLGMKT VLVERYATLG GVCLNVGCIP
SKALLHTALV IDEAEALRSH GITFGKPQID LDKLRDFKSG VVKKLTGGLA GMAKMRKVEV
VTGTGSFVDP HHMEVQVEGG KKVVKFKQAI IAAGSEAVKL PFIPEDPRVV DSTGALELRQ
IPQRMLVIGG GIIGLEMATV YATLGAQIDV VEMLDGLMAG ADRDLVKVWE KYNSKRFANV
MLKTKTTAAE AKDDGIYVSF EGEKAPAEAQ RYDLVLVAVG RSPNGKKIGA DKAGVAVTER
GFIDVDKQMR TNVPHIFAIG DIVGQPMLAH KAVHEAHVAA EVAHGEKAYF DALQIPSVAY
TDPEVAWAGK TEDQLKAEGI KYGKAVFPWA ASGRAIANGR DEGFTKLLFD EETHRVIGGG
IVGLNAGDLI SEVCLAVEMG ADATDIGKTI HPHPTLGESI GMAAELYEGV CTDLPPQKKK
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