| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2584 |
|---|
| Symbol | |
|---|
| ID | 6283423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2916643 |
|---|
| End bp | 2918058 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642622143 |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_001896203 |
|---|
| Protein GI | 187924561 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
|---|
| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.31363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000668194 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCC AATCGATGCA GTTCAAAGCA CGTGCCGGTC AGAAACTCGC CGACCAGCGT
CTGCAGCAGA ACCTCACCAA GCTGTCGACC AAGTTCGTAT CGGCTCGCGC CACGGCCATG
ACCGCGATCG ATTTTCCCGC CACGCGCGCC GCACTGAAGG AGCGCCGTAA TCGCGCGCTG
GAAAATCTCG ATGTGTGGCT GGAAACCTTC GAGCGCGAAG CGGCCCGGCG CGGCGTGACG
GTGCTGTTCG CCGAGACGAC CCAGGAAGCC GCGCGGCTCG TCGGCGACAT TGCGCGCCGG
CACGAGGTAA AAAAGGTGAT CAAGACCAAG TCGATGGTCA CCGAAGAAAT GCGCCTGAAC
GAAGTGCTCG GGCAGATGGG CGTGCAATCC ATCGAAACCG ATCTGGGTGA GTACATTCTG
CAGATCAACG ACAACGAGCC GCCGAGCCAC ATCATCGCGC CAGTCGTCCA TAAAGATAAG
GACGAGATCG CCGACCTATT TGCGAAGACT CACAACCGCC CGCGCCTCAC CGAAATCACC
GACATGACGC GAGAAGCGCG CGAGATGCTG CGTCCGCATT TCATGACCGC GGACATGGGC
GTGACTGGCG GCAATTTCGT GGTGGCGGAA ACGGGCTCGG TCGTCCTGGT CACGAACGAG
GGCAACGAGG GCATGTGCAC CGTGATGCCA CGCGTGCACG TAGCGGTGAC GGGCATCGAG
AAAGTGCTGC CCACACTCGA AGATCTGGCC ACGGCGATGC GTCTCTTGCC GCGCTCGGCG
ACCGGGCAGG CCACCTCGAA CTATTTTTCT GTGTTGACGG GGCCGCGCGG CGAGGGTGAC
CAGGACGGTC CCGAGCATAT GTACGTGGTG CTGGTCGACG GCGGGCGCAC GGGACTGATC
GGCGGCGACT TCCAGGAAAT GCTGAGATGC ATCCGCTGCG GCGCGTGCAT GAACCATTGC
CCGGTGTATC AGAAGGTGGG CGGCCATGCA TACGGCTGGG TCTATCCCGG CCCGATGGGT
TCGGTATTGA CGCCGAGCTA CGTGGGCATC GACAAGGCGC TGGATCTGCC GCAGGCCGCG
ACCTTGTGCG GCGAGTGCAA CAGCGTGTGC CCGGTGGGGA TTCCGCTATC CGATCTGTTG
CGCAAGCTGC GCGAGAAGCA GGTGGAGCGG CGTCTGCGAC CGTGGAAAGA GCGCGCCGGA
CTCGCCGTAT GGGGTTTTCT GGCGCTCCAC CCGGATGCGT ACGCGCTTTT TACTAAACTG
GCTGTCCGTG TGCTGGAACG CATGGGCGGG AGAAACCGGT CGATCGCCAG GCTGCCGCTG
GGCGGCGCGG GCTGGACTAA TACGCGGGAT ATGCCCGCTC CGGTCGGTCG GACGTTCAGG
GAGTTGTACG CGGCGCAGCG CAGCCATATT GGGTGA
|
|---|
| Protein sequence | MQVQSMQFKA RAGQKLADQR LQQNLTKLST KFVSARATAM TAIDFPATRA ALKERRNRAL
ENLDVWLETF EREAARRGVT VLFAETTQEA ARLVGDIARR HEVKKVIKTK SMVTEEMRLN
EVLGQMGVQS IETDLGEYIL QINDNEPPSH IIAPVVHKDK DEIADLFAKT HNRPRLTEIT
DMTREAREML RPHFMTADMG VTGGNFVVAE TGSVVLVTNE GNEGMCTVMP RVHVAVTGIE
KVLPTLEDLA TAMRLLPRSA TGQATSNYFS VLTGPRGEGD QDGPEHMYVV LVDGGRTGLI
GGDFQEMLRC IRCGACMNHC PVYQKVGGHA YGWVYPGPMG SVLTPSYVGI DKALDLPQAA
TLCGECNSVC PVGIPLSDLL RKLREKQVER RLRPWKERAG LAVWGFLALH PDAYALFTKL
AVRVLERMGG RNRSIARLPL GGAGWTNTRD MPAPVGRTFR ELYAAQRSHI G
|
|---|
| |